Protein–RNA interactions for Protein: M0QWN7

Usp35, Ubiquitin-specific peptidase 35, mousemouse

Predictions only

Length 1,009 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp35M0QWN7 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
Usp35M0QWN7 Man2a1-201ENSMUST00000086723 6991 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Tmem214-202ENSMUST00000201203 6110 ntAPPRIS P2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Zmynd19-202ENSMUST00000148042 1103 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Gm9803-201ENSMUST00000057649 563 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Psmd4-201ENSMUST00000071664 1276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Gm5417-201ENSMUST00000079706 384 ntBASIC18.78■□□□□ 0.6
Usp35M0QWN7 Rps28-201ENSMUST00000087342 392 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Coro7-202ENSMUST00000090480 1147 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Tsks-202ENSMUST00000120929 1843 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Smim15-205ENSMUST00000225972 2097 ntAPPRIS P1 BASIC18.78■□□□□ 0.6
Usp35M0QWN7 AC124581.1-201ENSMUST00000225416 1399 ntBASIC18.78■□□□□ 0.6
Usp35M0QWN7 Col4a3bp-202ENSMUST00000109444 5285 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
Usp35M0QWN7 Samd8-201ENSMUST00000022292 1574 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp35M0QWN7 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC18.77■□□□□ 0.6
Usp35M0QWN7 1810043G02Rik-201ENSMUST00000105397 1818 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp35M0QWN7 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp35M0QWN7 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
Usp35M0QWN7 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp35M0QWN7 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC18.77■□□□□ 0.6
Usp35M0QWN7 Gm42545-201ENSMUST00000202755 922 ntBASIC18.77■□□□□ 0.6
Usp35M0QWN7 Ndufa6-201ENSMUST00000023085 560 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp35M0QWN7 Grhpr-201ENSMUST00000045078 1280 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp35M0QWN7 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp35M0QWN7 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp35M0QWN7 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Usp35M0QWN7 Rraga-201ENSMUST00000091064 1618 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
Usp35M0QWN7 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.59
Usp35M0QWN7 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC18.77■□□□□ 0.59
Usp35M0QWN7 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC18.77■□□□□ 0.59
Usp35M0QWN7 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Mtmr1-201ENSMUST00000015358 4634 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Lysmd4-209ENSMUST00000208998 2110 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp35M0QWN7 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC18.76■□□□□ 0.59
Usp35M0QWN7 Pdxdc1-203ENSMUST00000115803 1268 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Nlrp5-ps-201ENSMUST00000044683 1913 ntTSL 2 BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Nfib-206ENSMUST00000107248 3294 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Ing1-207ENSMUST00000211007 2241 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
Usp35M0QWN7 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Icam5-201ENSMUST00000019616 2947 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Gm5421-201ENSMUST00000181698 2354 ntBASIC18.75■□□□□ 0.59
Usp35M0QWN7 Arrb2-204ENSMUST00000102564 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Gm28374-201ENSMUST00000162374 728 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
Usp35M0QWN7 AC153881.2-201ENSMUST00000214877 204 ntBASIC18.75■□□□□ 0.59
Usp35M0QWN7 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Etnk1-204ENSMUST00000205256 2647 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Trpc4ap-201ENSMUST00000041059 3204 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
Usp35M0QWN7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
Usp35M0QWN7 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Usp35M0QWN7 B3gat2-202ENSMUST00000140583 1737 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Smarcd2-201ENSMUST00000021052 2747 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Ptges3-202ENSMUST00000084771 1559 ntTSL 5 BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Mir6349-201ENSMUST00000184059 97 ntBASIC18.74■□□□□ 0.59
Usp35M0QWN7 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Gm9987-201ENSMUST00000069768 567 ntBASIC18.74■□□□□ 0.59
Usp35M0QWN7 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Syde1-201ENSMUST00000040580 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Fem1c-201ENSMUST00000036226 5726 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Ndufv1-202ENSMUST00000128787 1436 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Ndufv1-207ENSMUST00000134479 1438 ntTSL 5 BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC18.74■□□□□ 0.59
Usp35M0QWN7 A930012L18Rik-201ENSMUST00000181094 2364 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
Usp35M0QWN7 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Usp35M0QWN7 Kcnk3-201ENSMUST00000066295 3811 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
Retrieved 100 of 76,532 protein–RNA pairs in 21.2 ms