Protein–RNA interactions for Protein: J3QMI4

Calhm3, Calcium homeostasis modulator 3, mousemouse

Predictions only

Length 347 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Calhm3J3QMI4 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Calhm3J3QMI4 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Calhm3J3QMI4 Srcin1-201ENSMUST00000107590 5493 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
Calhm3J3QMI4 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
Calhm3J3QMI4 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC18.29■□□□□ 0.52
Calhm3J3QMI4 Chd5-205ENSMUST00000164662 9375 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
Calhm3J3QMI4 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Gatad2a-202ENSMUST00000116463 3363 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Map6-202ENSMUST00000107100 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Mir5130-201ENSMUST00000175160 84 ntBASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Gm9731-201ENSMUST00000209480 747 ntBASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Hoxa1-202ENSMUST00000120363 2043 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
Calhm3J3QMI4 Fam166b-201ENSMUST00000052829 1349 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Calhm3J3QMI4 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Calhm3J3QMI4 Mark2-203ENSMUST00000051711 2867 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
Calhm3J3QMI4 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Calhm3J3QMI4 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Calhm3J3QMI4 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
Calhm3J3QMI4 Gm4217-201ENSMUST00000182243 1002 ntBASIC18.27■□□□□ 0.52
Calhm3J3QMI4 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Calhm3J3QMI4 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
Calhm3J3QMI4 Mycbp-202ENSMUST00000106202 1536 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
Calhm3J3QMI4 Dcun1d1-201ENSMUST00000108182 4980 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
Calhm3J3QMI4 Ssx2ip-201ENSMUST00000039021 3410 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.51
Calhm3J3QMI4 Gm5112-201ENSMUST00000204407 2368 ntBASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Nectin3-201ENSMUST00000023334 3062 ntAPPRIS P4 TSL 1 (best) BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Smim1-205ENSMUST00000131325 842 ntTSL 5 BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Slc47a2-201ENSMUST00000093029 2377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Six3os1-206ENSMUST00000175921 2737 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Tspan5-201ENSMUST00000029800 6653 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Tmem39b-201ENSMUST00000102588 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
Calhm3J3QMI4 Gm43272-201ENSMUST00000200599 1584 ntBASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Bdkrb1-202ENSMUST00000182899 1313 ntAPPRIS P1 TSL 5 BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Bdkrb1-201ENSMUST00000041229 1338 ntAPPRIS P1 BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Tmem245-202ENSMUST00000107609 2643 ntAPPRIS P2 TSL 5 BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Anapc5-208ENSMUST00000197719 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Mfsd4a-203ENSMUST00000112370 2565 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Nptxr-201ENSMUST00000023057 5004 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Pih1d2-201ENSMUST00000000171 1256 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Il3ra-202ENSMUST00000223589 738 ntBASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Patz1-203ENSMUST00000094471 2930 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Hmgxb3-201ENSMUST00000091884 5101 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
Calhm3J3QMI4 Sirt1-207ENSMUST00000177694 3353 ntTSL 5 BASIC18.24■□□□□ 0.51
Calhm3J3QMI4 Hoxb2-201ENSMUST00000100523 1628 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Calhm3J3QMI4 Kctd15-201ENSMUST00000032709 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Calhm3J3QMI4 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
Calhm3J3QMI4 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Calhm3J3QMI4 Gm9745-201ENSMUST00000021573 684 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Calhm3J3QMI4 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Calhm3J3QMI4 Mgme1-203ENSMUST00000110028 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
Calhm3J3QMI4 Abcd4-210ENSMUST00000223107 2410 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
Calhm3J3QMI4 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
Calhm3J3QMI4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC18.24■□□□□ 0.51
Calhm3J3QMI4 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Map3k7cl-201ENSMUST00000026700 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Gm16061-201ENSMUST00000122167 857 ntBASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Gm45442-201ENSMUST00000210038 411 ntTSL 3 BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Aldoa-ps3-201ENSMUST00000217558 306 ntBASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Gm18032-201ENSMUST00000222541 538 ntBASIC18.23■□□□□ 0.51
Calhm3J3QMI4 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Sema3c-201ENSMUST00000030568 5491 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Sec61a2-202ENSMUST00000102981 2448 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
Calhm3J3QMI4 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
Retrieved 100 of 76,532 protein–RNA pairs in 34.1 ms