Protein–RNA interactions for Protein: F6ZNL5

Pcdh11x, Protocadherin 11 X-linked, mousemouse

Predictions only

Length 1,338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh11xF6ZNL5 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh11xF6ZNL5 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh11xF6ZNL5 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC19.38■□□□□ 0.69
Pcdh11xF6ZNL5 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh11xF6ZNL5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh11xF6ZNL5 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
Pcdh11xF6ZNL5 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
Pcdh11xF6ZNL5 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh11xF6ZNL5 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh11xF6ZNL5 Ext2-212ENSMUST00000184931 2629 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
Pcdh11xF6ZNL5 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
Pcdh11xF6ZNL5 Galnt1-206ENSMUST00000170243 4108 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Ppm1b-202ENSMUST00000112304 3262 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Gm13181-201ENSMUST00000120117 1069 ntBASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 4930412O13Rik-201ENSMUST00000026889 1187 ntAPPRIS P5 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Trak1-209ENSMUST00000210798 5363 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Ankrd17-214ENSMUST00000218526 4938 ntTSL 5 BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Pcdh11xF6ZNL5 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Prkci-201ENSMUST00000108249 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Dlg1-202ENSMUST00000064477 4663 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Amigo2-201ENSMUST00000053106 2871 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Traf3-203ENSMUST00000117269 6972 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Sema6d-203ENSMUST00000077847 6444 ntTSL 5 BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Pcdh11xF6ZNL5 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh11xF6ZNL5 Arrb2-203ENSMUST00000102563 1352 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh11xF6ZNL5 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh11xF6ZNL5 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC19.35■□□□□ 0.69
Pcdh11xF6ZNL5 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh11xF6ZNL5 Gm42545-201ENSMUST00000202755 922 ntBASIC19.35■□□□□ 0.69
Pcdh11xF6ZNL5 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Pcdh11xF6ZNL5 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh11xF6ZNL5 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh11xF6ZNL5 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh11xF6ZNL5 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh11xF6ZNL5 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Pcdh11xF6ZNL5 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 Gart-202ENSMUST00000120450 1865 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 Jph1-201ENSMUST00000038382 4809 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Pcdh11xF6ZNL5 AC121598.2-201ENSMUST00000228376 2325 ntBASIC19.33■□□□□ 0.69
Pcdh11xF6ZNL5 Rpl36al-202ENSMUST00000110619 1276 ntAPPRIS P1 BASIC19.33■□□□□ 0.69
Pcdh11xF6ZNL5 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.69
Pcdh11xF6ZNL5 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Pcdh11xF6ZNL5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Pcdh11xF6ZNL5 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC19.33■□□□□ 0.69
Pcdh11xF6ZNL5 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC19.33■□□□□ 0.69
Pcdh11xF6ZNL5 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pcdh11xF6ZNL5 Nrn1-203ENSMUST00000223611 1443 ntBASIC19.33■□□□□ 0.68
Pcdh11xF6ZNL5 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh11xF6ZNL5 Rhobtb3-201ENSMUST00000022078 4980 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh11xF6ZNL5 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh11xF6ZNL5 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh11xF6ZNL5 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Pcdh11xF6ZNL5 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
Pcdh11xF6ZNL5 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh11xF6ZNL5 Gm15635-204ENSMUST00000208024 2539 ntBASIC19.32■□□□□ 0.68
Pcdh11xF6ZNL5 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh11xF6ZNL5 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Pcdh11xF6ZNL5 Gm37292-201ENSMUST00000192062 758 ntBASIC19.32■□□□□ 0.68
Pcdh11xF6ZNL5 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC19.32■□□□□ 0.68
Pcdh11xF6ZNL5 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC19.32■□□□□ 0.68
Pcdh11xF6ZNL5 Smim15-206ENSMUST00000226042 1092 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Pcdh11xF6ZNL5 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms