Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Dhx15-205ENSMUST00000199321 2550 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Glrb-201ENSMUST00000029654 3029 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Ccdc188F6WEU2 Cxcl10-202ENSMUST00000118006 1353 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Dok5-201ENSMUST00000029075 1768 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Krt1-201ENSMUST00000023790 2445 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Ptgis-202ENSMUST00000088041 1711 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Gm26697-201ENSMUST00000180898 1760 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Ccdc188F6WEU2 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 4930455H04Rik-201ENSMUST00000117592 1341 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 Thap4-206ENSMUST00000190116 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 Kalrn-208ENSMUST00000114961 6128 ntTSL 5 BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 Plin1-202ENSMUST00000178257 1841 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 Urah-204ENSMUST00000185612 716 ntAPPRIS P3 TSL 3 BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 Gm38119-201ENSMUST00000192027 755 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 Nol9-202ENSMUST00000103197 2271 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 Ammecr1-201ENSMUST00000041317 5437 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Ccdc188F6WEU2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Dbr1-201ENSMUST00000066650 2261 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Ubl4a-206ENSMUST00000155676 2442 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Entpd4-205ENSMUST00000184314 989 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 9130024F11Rik-204ENSMUST00000187927 517 ntTSL 5 BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Entpd4b-201ENSMUST00000064846 989 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Hist1h2ad-201ENSMUST00000090776 572 ntAPPRIS P1 BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Eif5a-207ENSMUST00000108610 1409 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Srxn1-201ENSMUST00000041500 2812 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Ldb1-201ENSMUST00000026252 1718 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Ccdc188F6WEU2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 F2rl3-201ENSMUST00000058099 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Fcmr-201ENSMUST00000038829 1600 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Lrrc3c-201ENSMUST00000142268 902 ntAPPRIS P1 TSL 3 BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Gm26308-201ENSMUST00000157768 69 ntBASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Nptn-211ENSMUST00000177064 582 ntTSL 5 BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Il11ra1-202ENSMUST00000108040 1837 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Ovol2-202ENSMUST00000103171 1547 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Gm18856-201ENSMUST00000178096 1374 ntBASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Ccdc188F6WEU2 Zfp943-202ENSMUST00000153985 1598 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc188F6WEU2 Foxd1-201ENSMUST00000105098 5064 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Ccdc188F6WEU2 Tekt1-201ENSMUST00000021155 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc188F6WEU2 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc188F6WEU2 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc188F6WEU2 2210408F21Rik-210ENSMUST00000151076 539 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc188F6WEU2 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc188F6WEU2 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc188F6WEU2 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC17.75■□□□□ 0.43
Ccdc188F6WEU2 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
Ccdc188F6WEU2 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Ccdc188F6WEU2 Cyp4f15-204ENSMUST00000168171 2168 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 Tmbim1-201ENSMUST00000016309 2378 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 Zfp523-201ENSMUST00000002318 2710 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 Adcy9-203ENSMUST00000120080 4974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 4930505A04Rik-201ENSMUST00000041763 904 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 Myo1b-202ENSMUST00000046390 5052 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 AC157650.3-201ENSMUST00000225058 1476 ntBASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 Ercc6l2-202ENSMUST00000021926 1592 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Ccdc188F6WEU2 Magi2-202ENSMUST00000101558 6530 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc188F6WEU2 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc188F6WEU2 Cpne7-201ENSMUST00000037900 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc188F6WEU2 Kcnn4-202ENSMUST00000205428 1945 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc188F6WEU2 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC17.73■□□□□ 0.43
Ccdc188F6WEU2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc188F6WEU2 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc188F6WEU2 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC17.73■□□□□ 0.43
Ccdc188F6WEU2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Ccdc188F6WEU2 Atpaf1-203ENSMUST00000176047 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 38 ms