Protein–RNA interactions for Protein: E9Q5G2

Pcdhb9, Protocadherin beta 9, mousemouse

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhb9E9Q5G2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 Csf3-201ENSMUST00000038886 1413 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 A930001A20Rik-201ENSMUST00000182586 1366 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 Ddx39b-203ENSMUST00000173731 2848 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
Pcdhb9E9Q5G2 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC20.64■□□□□ 0.9
Pcdhb9E9Q5G2 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Gm13559-201ENSMUST00000120476 863 ntBASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Csnk1e-203ENSMUST00000122044 3174 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Cacul1-202ENSMUST00000111460 5561 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Pcdhb9E9Q5G2 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Bmpr1a-201ENSMUST00000049005 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Dennd2a-201ENSMUST00000036877 4468 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Cyp4f13-204ENSMUST00000139353 1389 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Gm7638-201ENSMUST00000121348 967 ntBASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Mir7071-201ENSMUST00000184847 69 ntBASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Zfas1-205ENSMUST00000189909 738 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
Pcdhb9E9Q5G2 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 Psmd6-201ENSMUST00000022256 1387 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 Nus1-201ENSMUST00000023830 4605 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 Gm37194-201ENSMUST00000193092 3031 ntBASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 Gm19721-201ENSMUST00000195284 1764 ntBASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 Nlgn2-202ENSMUST00000108634 5568 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
Pcdhb9E9Q5G2 Zar1-201ENSMUST00000073528 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Ptpra-201ENSMUST00000028769 3227 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Brpf3-201ENSMUST00000004985 5766 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Zcchc6-207ENSMUST00000225576 2499 ntBASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Slc25a51-203ENSMUST00000132815 1005 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Gm20403-201ENSMUST00000173803 372 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Gm43353-201ENSMUST00000199224 1295 ntBASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Rpl18a-206ENSMUST00000212709 700 ntTSL 2 BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Cacul1-203ENSMUST00000166712 5700 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Agbl4-205ENSMUST00000106591 1406 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Tle4-202ENSMUST00000167776 4545 ntAPPRIS ALT1 TSL 5 BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 AC125311.2-201ENSMUST00000227477 1940 ntBASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Tmem198-202ENSMUST00000113575 2185 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
Pcdhb9E9Q5G2 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 Zfp64-202ENSMUST00000109161 1009 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 AC153881.2-201ENSMUST00000214877 204 ntBASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 1700096K18Rik-201ENSMUST00000188465 1454 ntBASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
Pcdhb9E9Q5G2 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 Pitx2-207ENSMUST00000174661 1942 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 Khdc3-204ENSMUST00000173734 1228 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
Pcdhb9E9Q5G2 Cnih3-204ENSMUST00000209607 564 ntTSL 5 BASIC20.59■□□□□ 0.89
Retrieved 100 of 76,532 protein–RNA pairs in 35.9 ms