Protein–RNA interactions for Protein: E9Q2N0

Cpsf4l, Cleavage and polyadenylation-specific factor 4-like, mousemouse

Predictions only

Length 280 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4lE9Q2N0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Atp6v0a2-201ENSMUST00000037865 5345 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 A530016L24Rik-202ENSMUST00000223266 1547 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Smim22-201ENSMUST00000178155 429 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Gm10517-202ENSMUST00000192970 758 ntBASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 2810405F15Rik-201ENSMUST00000195368 932 ntBASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Gm10812-201ENSMUST00000099864 546 ntBASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Chst3-202ENSMUST00000135158 6108 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Txnl4b-201ENSMUST00000034159 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Hspa1l-201ENSMUST00000007248 2472 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Cpsf4lE9Q2N0 Atp11a-202ENSMUST00000091237 7443 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf4lE9Q2N0 Smarcc1-207ENSMUST00000199896 5773 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf4lE9Q2N0 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf4lE9Q2N0 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.83□□□□□ -0.03
Cpsf4lE9Q2N0 Nfs1-201ENSMUST00000029147 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Cpsf4lE9Q2N0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 C2cd4c-202ENSMUST00000178228 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Atox1-201ENSMUST00000108857 541 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 4933406B15Rik-201ENSMUST00000220065 1182 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Cerkl-205ENSMUST00000143974 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Ccdc102a-201ENSMUST00000077955 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Slc30a5-205ENSMUST00000225922 2722 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Slc9a5-201ENSMUST00000073149 3499 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Itsn2-215ENSMUST00000220311 6080 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Cpsf4lE9Q2N0 Panx2-203ENSMUST00000162424 3391 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Slc16a3-201ENSMUST00000070653 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Slc35g1-201ENSMUST00000054098 3471 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Atxn7-203ENSMUST00000223880 2946 ntAPPRIS P2 BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Tgds-201ENSMUST00000022727 1682 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Foxo3-204ENSMUST00000175881 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Mir1199-201ENSMUST00000117015 119 ntBASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Ost4-201ENSMUST00000132034 576 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Gm4974-201ENSMUST00000209974 875 ntBASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Acot1-201ENSMUST00000168120 2272 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Gm43702-201ENSMUST00000198772 2546 ntBASIC14.82□□□□□ -0.04
Cpsf4lE9Q2N0 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Adgra2-201ENSMUST00000033876 5760 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Tmem125-201ENSMUST00000060214 1864 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Gm28914-201ENSMUST00000188115 667 ntTSL 2 BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 AC175538.1-201ENSMUST00000225343 1269 ntBASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Ubtf-206ENSMUST00000107123 2759 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Nova2-202ENSMUST00000220302 8372 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Nova2-201ENSMUST00000032571 8372 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Cpsf4lE9Q2N0 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Cep83-201ENSMUST00000020212 3639 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Hmga1-204ENSMUST00000118570 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 AC125311.2-201ENSMUST00000227477 1940 ntBASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Aurkb-201ENSMUST00000021277 1950 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Tlk2-201ENSMUST00000015107 3212 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Cpsf4lE9Q2N0 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 17.2 ms