Protein–RNA interactions for Protein: E9PXX9

Slc28a1, Sodium/nucleoside cotransporter, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc28a1E9PXX9 Tmx1-201ENSMUST00000021471 2795 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Mob2-205ENSMUST00000211000 1646 ntTSL 5 BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Xpo4-209ENSMUST00000174545 8680 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Yeats4-201ENSMUST00000020382 1327 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Stau2-203ENSMUST00000115359 1151 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Rian-206ENSMUST00000182119 329 ntTSL 3 BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Epdr1-204ENSMUST00000221014 692 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Itgb4-205ENSMUST00000106461 6208 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Stk32c-202ENSMUST00000165870 1883 ntTSL 5 BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Neo1-201ENSMUST00000068664 7379 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Nectin3-202ENSMUST00000023335 9116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Slc28a1E9PXX9 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Ifrd2-201ENSMUST00000010192 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Vamp4-203ENSMUST00000132158 2752 ntTSL 3 BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Rab11fip5-202ENSMUST00000204087 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Slc28a1E9PXX9 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Itpkb-201ENSMUST00000070181 6235 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Smurf2-201ENSMUST00000092517 3125 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Ferd3l-201ENSMUST00000061035 886 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Zic1-201ENSMUST00000034927 5606 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Ube3c-201ENSMUST00000049453 5048 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Slc28a1E9PXX9 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Gm26995-201ENSMUST00000182216 1306 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Col17a1-201ENSMUST00000026045 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Zfp446-202ENSMUST00000108535 2594 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Slc28a1E9PXX9 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Esyt2-205ENSMUST00000220816 4287 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Kcnab3-201ENSMUST00000018614 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Tm7sf3-201ENSMUST00000037709 3241 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Fez2-202ENSMUST00000112487 2020 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Rtcb-201ENSMUST00000001834 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Sapcd2-202ENSMUST00000100323 1761 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Plekha7-210ENSMUST00000182834 5257 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Pigx-210ENSMUST00000155966 963 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Slc28a1E9PXX9 Dtwd2-203ENSMUST00000163590 2857 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms