Protein–RNA interactions for Protein: E9PXF0

Pcdh17, Protocadherin 17, mousemouse

Predictions only

Length 1,157 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh17E9PXF0 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Nfix-204ENSMUST00000109764 5476 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Mchr1-201ENSMUST00000166855 2188 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Prob1-203ENSMUST00000190196 4888 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Ppp2r1b-206ENSMUST00000175645 1931 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Hes3-201ENSMUST00000094438 1829 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Ilk-212ENSMUST00000163389 1749 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Pcdh17E9PXF0 Scaf8-201ENSMUST00000076734 4869 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Creld1-201ENSMUST00000032422 2306 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Esrrb-201ENSMUST00000021680 2136 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Slc10a4-201ENSMUST00000031127 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Lrrc47-201ENSMUST00000030894 3395 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Dlk2-202ENSMUST00000166280 1341 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Uhmk1-202ENSMUST00000123399 7775 ntTSL 5 BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Dmtn-210ENSMUST00000228824 2377 ntBASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Zbtb8a-201ENSMUST00000030610 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Golga7b-202ENSMUST00000122375 2836 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Vmn1r17-201ENSMUST00000227186 2234 ntAPPRIS P2 BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Tial1-201ENSMUST00000033135 1580 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Pcdh17E9PXF0 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Rabgap1l-201ENSMUST00000028049 2748 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 5430402O13Rik-201ENSMUST00000126537 869 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Serf1-205ENSMUST00000152286 465 ntTSL 3 BASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Gm7889-201ENSMUST00000185591 958 ntBASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Gm10517-202ENSMUST00000192970 758 ntBASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Nubp1-201ENSMUST00000023146 2121 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Pfdn4-201ENSMUST00000063682 935 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Ube2d2a-201ENSMUST00000167406 2393 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Pcdh17E9PXF0 Tacc3-203ENSMUST00000114426 2187 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Adpgk-205ENSMUST00000217570 2484 ntAPPRIS P2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Klhl25-202ENSMUST00000171155 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Sorcs2-201ENSMUST00000037370 5707 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Gm20544-201ENSMUST00000174338 690 ntTSL 3 BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Gm32151-201ENSMUST00000223521 915 ntTSL 5 BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Acvr1b-201ENSMUST00000000544 4413 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Paqr4-201ENSMUST00000024702 2507 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Ndufa10-201ENSMUST00000027478 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Pcdh17E9PXF0 Ttpal-202ENSMUST00000109408 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh17E9PXF0 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh17E9PXF0 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh17E9PXF0 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh17E9PXF0 Pparg-202ENSMUST00000171644 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh17E9PXF0 Gm42922-201ENSMUST00000195887 2078 ntBASIC16.27■□□□□ 0.2
Pcdh17E9PXF0 Ccnd3-ps-201ENSMUST00000117963 881 ntBASIC16.27■□□□□ 0.2
Pcdh17E9PXF0 Gm14968-201ENSMUST00000155528 769 ntTSL 3 BASIC16.27■□□□□ 0.2
Pcdh17E9PXF0 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh17E9PXF0 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh17E9PXF0 Cenps-201ENSMUST00000030813 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Pcdh17E9PXF0 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh17E9PXF0 Gm37811-201ENSMUST00000192416 2601 ntBASIC16.27■□□□□ 0.19
Pcdh17E9PXF0 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh17E9PXF0 Cyp2r1-201ENSMUST00000032908 1627 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Pcdh17E9PXF0 Arhgap21-201ENSMUST00000114594 7351 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Lzic-201ENSMUST00000030842 1817 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Gm5901-201ENSMUST00000106805 1140 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Arrdc4-202ENSMUST00000118110 1129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Gm12085-201ENSMUST00000119263 940 ntBASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Ddah2-204ENSMUST00000174493 1254 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Fam167b-201ENSMUST00000052835 913 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Gab1-202ENSMUST00000210676 4985 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Ptges3-201ENSMUST00000052798 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Dmtn-207ENSMUST00000228001 2437 ntBASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Gm21949-201ENSMUST00000182006 2369 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Trmo-202ENSMUST00000086563 1554 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Pcdh17E9PXF0 Rcc1-201ENSMUST00000030726 2278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Pcdh17E9PXF0 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.3 ms