Protein–RNA interactions for Protein: E9PWQ3

Col6a3, Collagen, type VI, alpha 3, mousemouse

Predictions only

Length 3,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3E9PWQ3 Cers2-201ENSMUST00000015858 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a3E9PWQ3 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a3E9PWQ3 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a3E9PWQ3 Eif2b4-202ENSMUST00000114603 1966 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a3E9PWQ3 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a3E9PWQ3 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.63■□□□□ 0.41
Col6a3E9PWQ3 Mrpl36-202ENSMUST00000221730 717 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
Col6a3E9PWQ3 Trappc4-201ENSMUST00000034623 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Col6a3E9PWQ3 Pink1-201ENSMUST00000030536 2375 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 AC120002.2-201ENSMUST00000220205 773 ntBASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Igfbpl1-201ENSMUST00000044297 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Gm11492-201ENSMUST00000060360 1972 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Fezf2-203ENSMUST00000224714 2429 ntAPPRIS P1 BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 AC152827.1-201ENSMUST00000221143 2189 ntBASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Plin1-201ENSMUST00000032762 1916 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Ndufaf8-201ENSMUST00000106223 781 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Gm13616-201ENSMUST00000120600 222 ntBASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 D1Ertd622e-203ENSMUST00000149927 2703 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Sigmar1-202ENSMUST00000071561 1547 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Irak1-205ENSMUST00000114353 1896 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
Col6a3E9PWQ3 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Gm37171-201ENSMUST00000192636 1185 ntBASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Gm45683-201ENSMUST00000210825 1247 ntBASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 CT025535.1-201ENSMUST00000227172 491 ntBASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Cmtm5-203ENSMUST00000227441 610 ntBASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Rasgef1a-201ENSMUST00000164960 3284 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Tor3a-207ENSMUST00000188964 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 AC155729.1-201ENSMUST00000227758 544 ntBASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Pacsin2-201ENSMUST00000056177 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Pgrmc2-201ENSMUST00000058578 3007 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Gbx2-201ENSMUST00000036954 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Col6a3E9PWQ3 Myl12b-201ENSMUST00000038446 1253 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Gm12504-201ENSMUST00000120860 2231 ntBASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Nars2-202ENSMUST00000107159 1777 ntTSL 5 BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Ttc14-211ENSMUST00000200271 2724 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Agfg1-202ENSMUST00000113444 3142 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Mfsd10-201ENSMUST00000001109 1907 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Ccdc88c-204ENSMUST00000223097 1253 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Donson-202ENSMUST00000114031 2147 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Ltk-202ENSMUST00000082130 2767 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Inpp5a-203ENSMUST00000106098 2826 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Mgrn1-201ENSMUST00000023159 3293 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Col6a3E9PWQ3 Raver2-202ENSMUST00000106955 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Slc39a5-201ENSMUST00000042666 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 4930524B15Rik-201ENSMUST00000102829 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Gm7628-201ENSMUST00000134690 2010 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Tm4sf5-201ENSMUST00000019063 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Mrpl54-201ENSMUST00000046114 604 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Nmnat3-202ENSMUST00000112937 1898 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Vstm4-201ENSMUST00000053175 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Arf1-202ENSMUST00000163300 1991 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Gm20949-201ENSMUST00000206478 952 ntBASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 AC090659.1-201ENSMUST00000224334 768 ntBASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Col6a3E9PWQ3 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a3E9PWQ3 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a3E9PWQ3 Zkscan3-202ENSMUST00000116433 1421 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a3E9PWQ3 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a3E9PWQ3 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a3E9PWQ3 Gpr162-201ENSMUST00000046893 2676 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a3E9PWQ3 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a3E9PWQ3 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC17.58■□□□□ 0.41
Col6a3E9PWQ3 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC17.58■□□□□ 0.41
Col6a3E9PWQ3 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.41
Col6a3E9PWQ3 Gm7230-201ENSMUST00000173026 815 ntBASIC17.58■□□□□ 0.41
Col6a3E9PWQ3 Gm43935-201ENSMUST00000203569 1050 ntBASIC17.58■□□□□ 0.41
Col6a3E9PWQ3 Tacstd2-201ENSMUST00000058178 1735 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
Col6a3E9PWQ3 Ube2v2-202ENSMUST00000115776 1236 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Col6a3E9PWQ3 3830408C21Rik-206ENSMUST00000225489 1810 ntBASIC17.58■□□□□ 0.4
Col6a3E9PWQ3 Smad6-201ENSMUST00000041029 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Col6a3E9PWQ3 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms