Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm12887B1AVM1 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.24□□□□□ -0.13
Gm12887B1AVM1 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Gm12887B1AVM1 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm12887B1AVM1 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm12887B1AVM1 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm12887B1AVM1 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Gm12887B1AVM1 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Dnajc19-201ENSMUST00000011029 2499 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Prr22-201ENSMUST00000168666 1350 ntAPPRIS P1 TSL 3 BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Hand1-201ENSMUST00000036917 1904 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Capzb-202ENSMUST00000042675 1604 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Bambi-201ENSMUST00000025075 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Tlk2-204ENSMUST00000106941 3699 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Mir7075-201ENSMUST00000184187 82 ntBASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Copz2-201ENSMUST00000018816 930 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 2810025M15Rik-201ENSMUST00000061537 1194 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Ldb1-205ENSMUST00000137771 2014 ntTSL 5 BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Ctsf-201ENSMUST00000119694 1975 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.23□□□□□ -0.13
Gm12887B1AVM1 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Zufsp-202ENSMUST00000218055 2180 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Ankra2-205ENSMUST00000150916 1028 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Gm43173-201ENSMUST00000202246 593 ntBASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Gm44731-201ENSMUST00000203086 542 ntTSL 3 BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 CT010467.1-202ENSMUST00000205406 714 ntBASIC14.22□□□□□ -0.13
Gm12887B1AVM1 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Wdr70-203ENSMUST00000227371 1130 ntBASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Rab4b-201ENSMUST00000093040 1192 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Gm26803-201ENSMUST00000181705 2011 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Gm12887B1AVM1 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm12887B1AVM1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.21□□□□□ -0.13
Gm12887B1AVM1 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm12887B1AVM1 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm12887B1AVM1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm12887B1AVM1 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm12887B1AVM1 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm12887B1AVM1 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Gm12887B1AVM1 A830035A12Rik-201ENSMUST00000147445 861 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Gm12887B1AVM1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC14.21□□□□□ -0.13
Gm12887B1AVM1 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Gm12887B1AVM1 Tmem163-203ENSMUST00000160616 2657 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Gm12887B1AVM1 Stum-201ENSMUST00000136521 6506 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm12887B1AVM1 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm12887B1AVM1 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm12887B1AVM1 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm12887B1AVM1 Snrpa-201ENSMUST00000080356 1365 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm12887B1AVM1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm12887B1AVM1 Rhof-201ENSMUST00000031401 2208 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Gm12887B1AVM1 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Nmnat3-201ENSMUST00000112935 2166 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Aktip-201ENSMUST00000109609 1171 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Gm14281-201ENSMUST00000121700 1294 ntBASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Gm8493-201ENSMUST00000196881 489 ntBASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Gm40848-201ENSMUST00000221998 324 ntBASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Rbp4-201ENSMUST00000025951 1243 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Gm9847-201ENSMUST00000052528 599 ntBASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Scand1-201ENSMUST00000079125 759 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Dnaaf3-201ENSMUST00000094897 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Gm12887B1AVM1 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 32.2 ms