Protein–RNA interactions for Protein: B1AVK5

Col4a6, Collagen, type IV, alpha 6, mousemouse

Predictions only

Length 1,691 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a6B1AVK5 Skp1a-203ENSMUST00000109072 1754 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Adal-203ENSMUST00000110662 1231 ntTSL 5 BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Gm20422-202ENSMUST00000149782 956 ntTSL 2 BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Ighv6-1-201ENSMUST00000193612 343 ntBASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Mzt1-203ENSMUST00000227948 952 ntBASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Prmt2-202ENSMUST00000099571 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Pxk-202ENSMUST00000112689 2840 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
Col4a6B1AVK5 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 Babam1-201ENSMUST00000002473 1433 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 Smad2-205ENSMUST00000168423 2857 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 Hoxd13-201ENSMUST00000001872 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 Ism1-201ENSMUST00000099307 2944 ntTSL 5 BASIC18.1■□□□□ 0.49
Col4a6B1AVK5 Gnb2-203ENSMUST00000111023 1471 ntTSL 5 BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Gm45328-201ENSMUST00000210942 917 ntBASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Zfp777-202ENSMUST00000114583 3111 ntAPPRIS P3 TSL 5 BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Gm10616-201ENSMUST00000205285 2127 ntBASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Dvl1-201ENSMUST00000030948 3358 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Gm9857-201ENSMUST00000050914 393 ntAPPRIS P1 BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
Col4a6B1AVK5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col4a6B1AVK5 Fbxl5-204ENSMUST00000119523 2801 ntTSL 5 BASIC18.08■□□□□ 0.49
Col4a6B1AVK5 Kcnn2-208ENSMUST00000211323 2046 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col4a6B1AVK5 Cyb561-201ENSMUST00000019734 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col4a6B1AVK5 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC18.08■□□□□ 0.49
Col4a6B1AVK5 Shox2-201ENSMUST00000029422 3079 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
Col4a6B1AVK5 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC18.08■□□□□ 0.48
Col4a6B1AVK5 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a6B1AVK5 Gm5867-201ENSMUST00000063197 592 ntBASIC18.08■□□□□ 0.48
Col4a6B1AVK5 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a6B1AVK5 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC18.08■□□□□ 0.48
Col4a6B1AVK5 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a6B1AVK5 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC18.08■□□□□ 0.48
Col4a6B1AVK5 Nudt3-201ENSMUST00000025050 2193 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a6B1AVK5 Bnipl-201ENSMUST00000098871 1414 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a6B1AVK5 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a6B1AVK5 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
Col4a6B1AVK5 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Atp6v1g2-201ENSMUST00000068261 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 AC125350.1-201ENSMUST00000225115 903 ntBASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Gm45141-201ENSMUST00000206502 1888 ntBASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Negr1-203ENSMUST00000106065 1953 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Eno1-202ENSMUST00000080926 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Zkscan4-202ENSMUST00000225845 1506 ntBASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Snrnp48-201ENSMUST00000091641 1785 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
Col4a6B1AVK5 Stk35-201ENSMUST00000165413 2882 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Naa10-204ENSMUST00000114389 1031 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Cxcl14-201ENSMUST00000021970 1827 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Tmem123-201ENSMUST00000052865 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Mgat1-213ENSMUST00000167400 3151 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Cd82-204ENSMUST00000111257 1003 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Gm26887-201ENSMUST00000181282 547 ntTSL 5 BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Birc2-201ENSMUST00000054878 378 ntBASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Olfr1232-201ENSMUST00000099785 936 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
Col4a6B1AVK5 Gcat-202ENSMUST00000171999 1763 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a6B1AVK5 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC18.05■□□□□ 0.48
Col4a6B1AVK5 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC18.05■□□□□ 0.48
Col4a6B1AVK5 Gpr162-204ENSMUST00000204667 2855 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a6B1AVK5 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
Col4a6B1AVK5 Dio3-202ENSMUST00000173014 2030 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
Retrieved 100 of 76,532 protein–RNA pairs in 20.2 ms