Protein–RNA interactions for Protein: A3KG49

Gm5640, Predicted gene 5640, mousemouse

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm5640A3KG49 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Antxr2-202ENSMUST00000199088 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Mfsd12-201ENSMUST00000044844 3971 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Ntrk1-201ENSMUST00000029712 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Gm13063-201ENSMUST00000132247 669 ntTSL 3 BASIC17.82■□□□□ 0.44
Gm5640A3KG49 4933406I18Rik-202ENSMUST00000163996 904 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Plac9b-203ENSMUST00000184142 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Il17re-208ENSMUST00000204774 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Fancg-201ENSMUST00000030165 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Igsf23-201ENSMUST00000043440 1908 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gm5640A3KG49 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Rab6a-201ENSMUST00000032946 3214 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Chrac1-202ENSMUST00000134353 538 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Ramp1-202ENSMUST00000165855 852 ntTSL 2 BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Gon7-201ENSMUST00000173969 1152 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5640A3KG49 1700064M15Rik-201ENSMUST00000185726 645 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Gnai2-203ENSMUST00000192837 421 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Fam228b-205ENSMUST00000218575 1281 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
Gm5640A3KG49 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Ptrh1-201ENSMUST00000066352 952 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Tm2d3-202ENSMUST00000065574 1478 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gm5640A3KG49 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Kif5b-201ENSMUST00000025083 6032 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Hist1h4a-201ENSMUST00000102964 539 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Gm14281-201ENSMUST00000121700 1294 ntBASIC17.8■□□□□ 0.44
Gm5640A3KG49 Polr3gl-204ENSMUST00000145001 607 ntTSL 3 BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Mrgbp-206ENSMUST00000169630 1192 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Hikeshi-201ENSMUST00000075010 715 ntTSL 3 BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Gpx4-201ENSMUST00000097227 995 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Asph-204ENSMUST00000084915 2884 ntTSL 5 BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
Gm5640A3KG49 Poglut1-201ENSMUST00000036210 2758 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Nsmf-203ENSMUST00000100334 2957 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Msmo1-201ENSMUST00000034015 2044 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Cox18-202ENSMUST00000118816 1307 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Igfbp7-202ENSMUST00000163898 1200 ntAPPRIS P4 TSL 5 BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Gpx7-201ENSMUST00000030332 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Zfp428-201ENSMUST00000071361 1182 ntAPPRIS P3 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Ryr2-203ENSMUST00000220597 4924 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
Gm5640A3KG49 Hoxc4-202ENSMUST00000165375 2121 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Capzb-203ENSMUST00000102507 1702 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Dhx32-203ENSMUST00000106139 2233 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Rbp4-202ENSMUST00000112335 930 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5640A3KG49 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Wdr4-203ENSMUST00000167419 813 ntTSL 3 BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Mir7075-201ENSMUST00000184187 82 ntBASIC17.78■□□□□ 0.44
Gm5640A3KG49 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Gm10306-201ENSMUST00000094969 533 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Wdr41-205ENSMUST00000160801 3062 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Wdr41-201ENSMUST00000056512 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Shisa2-201ENSMUST00000053949 3119 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Gm5640A3KG49 Gm20628-201ENSMUST00000177363 3215 ntBASIC17.77■□□□□ 0.44
Gm5640A3KG49 Gabpb1-203ENSMUST00000103226 1338 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5640A3KG49 Klhl25-203ENSMUST00000205612 1343 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5640A3KG49 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5640A3KG49 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5640A3KG49 Pard6g-201ENSMUST00000070219 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5640A3KG49 Dscc1-202ENSMUST00000110231 1499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5640A3KG49 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC17.77■□□□□ 0.44
Gm5640A3KG49 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5640A3KG49 Hacd1-203ENSMUST00000114753 993 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5640A3KG49 Ssbp1-203ENSMUST00000117411 933 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5640A3KG49 Cox5b-204ENSMUST00000193210 865 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Gm5640A3KG49 Gm43173-201ENSMUST00000202246 593 ntBASIC17.77■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 108.2 ms