Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Pacsin3-203ENSMUST00000111349 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Gm26837-201ENSMUST00000180821 2110 ntTSL 5 BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Nab2-201ENSMUST00000026469 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Skap1-203ENSMUST00000100521 1539 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Skap1-204ENSMUST00000103154 1507 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Gm26634-201ENSMUST00000181146 1511 ntTSL 5 BASIC14.74□□□□□ -0.05
Col6a4A2AX52 BC037034-205ENSMUST00000159649 2093 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Gm27459-201ENSMUST00000184860 107 ntBASIC14.74□□□□□ -0.05
Col6a4A2AX52 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Col6a4A2AX52 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.74□□□□□ -0.05
Col6a4A2AX52 Klc3-203ENSMUST00000108458 1823 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Dact2-201ENSMUST00000053218 2808 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Kcnk4-201ENSMUST00000025908 1715 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Spry1-202ENSMUST00000108107 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Trmo-201ENSMUST00000030015 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Ncmap-205ENSMUST00000105860 2000 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Gm28051-201ENSMUST00000179306 445 ntAPPRIS P1 TSL 2 BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Klhdc8b-214ENSMUST00000195435 1612 ntTSL 5 BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Wtap-204ENSMUST00000159986 3187 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Mmp11-201ENSMUST00000000924 2288 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 4933427J07Rik-201ENSMUST00000156275 1533 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC14.73□□□□□ -0.05
Col6a4A2AX52 Gm27389-201ENSMUST00000183622 195 ntBASIC14.72□□□□□ -0.05
Col6a4A2AX52 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Bend4-204ENSMUST00000201972 8268 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Leng1-201ENSMUST00000019878 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Pianp-201ENSMUST00000032479 2250 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Sox10-201ENSMUST00000040019 2713 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Gm11355-201ENSMUST00000121120 306 ntBASIC14.72□□□□□ -0.05
Col6a4A2AX52 Gm11860-201ENSMUST00000122346 1010 ntBASIC14.72□□□□□ -0.05
Col6a4A2AX52 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 1700007L15Rik-201ENSMUST00000180923 737 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Nadk2-202ENSMUST00000100789 3578 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Mindy2-201ENSMUST00000049031 8081 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Nr1h3-204ENSMUST00000111356 1955 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Col6a4A2AX52 Cd248-201ENSMUST00000070630 2560 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Wnk2-211ENSMUST00000162581 6628 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Snx4-201ENSMUST00000023502 2442 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Kdelr2-201ENSMUST00000110731 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Auh-203ENSMUST00000119311 2627 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Acvr1-201ENSMUST00000056376 2394 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Dpy19l1-203ENSMUST00000142064 3489 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Spdya-202ENSMUST00000124001 1247 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Srgn-205ENSMUST00000162161 694 ntAPPRIS P1 TSL 3 BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Col6a4A2AX52 Larp1-203ENSMUST00000178636 6617 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.06
Col6a4A2AX52 Dolk-201ENSMUST00000100219 2104 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
Col6a4A2AX52 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a4A2AX52 Ndufv3-201ENSMUST00000046288 1537 ntAPPRIS P4 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a4A2AX52 Fst-202ENSMUST00000223640 2612 ntBASIC14.7□□□□□ -0.06
Col6a4A2AX52 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a4A2AX52 Gm3272-201ENSMUST00000181181 1229 ntBASIC14.7□□□□□ -0.06
Col6a4A2AX52 Gm43514-201ENSMUST00000198852 424 ntBASIC14.7□□□□□ -0.06
Col6a4A2AX52 Gm5864-201ENSMUST00000202263 970 ntBASIC14.7□□□□□ -0.06
Col6a4A2AX52 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a4A2AX52 Gm10566-201ENSMUST00000086739 996 ntBASIC14.7□□□□□ -0.06
Col6a4A2AX52 Spr-ps1-201ENSMUST00000089584 605 ntBASIC14.7□□□□□ -0.06
Col6a4A2AX52 Abr-202ENSMUST00000072740 5394 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col6a4A2AX52 Sstr1-202ENSMUST00000110671 1752 ntAPPRIS P1 TSL 2 BASIC14.7□□□□□ -0.06
Col6a4A2AX52 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a4A2AX52 Fgf23-201ENSMUST00000000186 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a4A2AX52 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a4A2AX52 Etv4-201ENSMUST00000017868 2395 ntAPPRIS ALT1 TSL 5 BASIC14.7□□□□□ -0.06
Col6a4A2AX52 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC14.7□□□□□ -0.06
Col6a4A2AX52 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Col6a4A2AX52 BC029722-201ENSMUST00000124586 1615 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Twist2-202ENSMUST00000186075 2525 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Col6a4A2AX52 1700041G16Rik-202ENSMUST00000186344 1824 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Col6a4A2AX52 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 22.2 ms