Protein–RNA interactions for Protein: A0A140T8N1

Igkv1-88, Immunoglobulin kappa chain variable 1-88 (Fragment), mousemouse

Predictions only

Length 120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv1-88A0A140T8N1 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Igkv1-88A0A140T8N1 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Cul4a-201ENSMUST00000016680 3728 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Sri-205ENSMUST00000148633 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Reep4-203ENSMUST00000226563 1444 ntBASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Tmem8b-203ENSMUST00000107866 4998 ntTSL 5 BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Ube2cbp-201ENSMUST00000034986 1790 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Arhgap8-207ENSMUST00000172307 1544 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Map3k6-201ENSMUST00000030677 4334 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Gnb2-204ENSMUST00000111027 1610 ntTSL 5 BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Gm15270-201ENSMUST00000125158 870 ntTSL 3 BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 CT010467.1-202ENSMUST00000205406 714 ntBASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 AC160393.1-201ENSMUST00000218378 1279 ntBASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Tmem147-201ENSMUST00000006478 870 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Tspan17-202ENSMUST00000099503 822 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Fam131a-202ENSMUST00000118919 2262 ntTSL 5 BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Adamts2-201ENSMUST00000040523 7266 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Tsc22d2-201ENSMUST00000099090 9799 ntAPPRIS P3 TSL 3 BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Igkv1-88A0A140T8N1 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Matn4-204ENSMUST00000109359 2179 ntTSL 5 BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Ripor2-202ENSMUST00000058009 2550 ntAPPRIS ALT2 TSL 2 BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Cbl-201ENSMUST00000037644 4901 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Ispd-201ENSMUST00000062041 2690 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Rab6b-202ENSMUST00000189134 716 ntTSL 3 BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Ndor1-202ENSMUST00000114349 2336 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Tgds-204ENSMUST00000228543 1594 ntBASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Gm16432-201ENSMUST00000094273 1663 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Igkv1-88A0A140T8N1 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Olfr94-201ENSMUST00000055324 1304 ntAPPRIS P2 BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Taf6l-211ENSMUST00000177056 2006 ntTSL 5 BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Gm15408-201ENSMUST00000124198 1379 ntTSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 S100a6-201ENSMUST00000001051 731 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Gm8309-201ENSMUST00000206627 1448 ntBASIC11.6□□□□□ -0.55
Igkv1-88A0A140T8N1 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Rrs1-201ENSMUST00000072079 2048 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Kank3-201ENSMUST00000048560 2641 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Nfix-201ENSMUST00000076715 1403 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Tmem185a-202ENSMUST00000114630 1307 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Hsd17b2-201ENSMUST00000034304 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Neurog1-201ENSMUST00000058475 1686 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Fuz-201ENSMUST00000071207 1698 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Ppfia3-207ENSMUST00000211067 4565 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Igkv1-88A0A140T8N1 Smox-209ENSMUST00000110189 1919 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Igkv1-88A0A140T8N1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Col4a3bp-201ENSMUST00000077672 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Rnf39-202ENSMUST00000173072 631 ntTSL 2 BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Sumo3-209ENSMUST00000174113 512 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 E130116L18Rik-201ENSMUST00000066954 306 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Igkv1-88A0A140T8N1 Vamp5-201ENSMUST00000074231 553 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 20.1 ms