Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 Fam107a-202ENSMUST00000120411 2093 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 Srsf11-202ENSMUST00000072875 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
Cfap99A0A140LIX9 Podxl2-202ENSMUST00000061262 2195 ntAPPRIS P3 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Stac2-201ENSMUST00000017544 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Timm29-201ENSMUST00000062125 3170 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Prickle4-201ENSMUST00000113299 990 ntTSL 5 BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Prickle4-202ENSMUST00000113300 1110 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 B230208B08Rik-201ENSMUST00000173049 404 ntTSL 3 BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Gm3375-201ENSMUST00000203929 796 ntBASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Bmt2-201ENSMUST00000045235 4143 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Lifr-202ENSMUST00000164529 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Xrcc6-202ENSMUST00000100399 3296 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Ubtf-204ENSMUST00000107117 3258 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Ptprf-201ENSMUST00000049074 7656 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
Cfap99A0A140LIX9 Fndc4-202ENSMUST00000172435 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Sprtn-201ENSMUST00000034467 4464 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Ruvbl1-201ENSMUST00000032165 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Rhod-202ENSMUST00000117462 1495 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Tmem80-202ENSMUST00000126510 959 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Kcnd3-202ENSMUST00000098761 7169 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Gm45141-201ENSMUST00000206502 1888 ntBASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Atp2c1-201ENSMUST00000038118 4876 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Pdia6-201ENSMUST00000057288 2175 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Bin2-204ENSMUST00000182775 1908 ntTSL 5 BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Cfap99A0A140LIX9 Akain1-201ENSMUST00000169935 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
Cfap99A0A140LIX9 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.95
Cfap99A0A140LIX9 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC20.95■□□□□ 0.95
Cfap99A0A140LIX9 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Tgds-204ENSMUST00000228543 1594 ntBASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Ramp2-202ENSMUST00000122006 899 ntTSL 2 BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Gm21362-201ENSMUST00000194272 928 ntBASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Otx2os1-204ENSMUST00000227221 751 ntBASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Schip1-203ENSMUST00000170788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Cyp26c1-201ENSMUST00000073391 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Rasgrp2-224ENSMUST00000167240 2192 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
Cfap99A0A140LIX9 Rilp-201ENSMUST00000042972 1489 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap99A0A140LIX9 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap99A0A140LIX9 Epo-203ENSMUST00000111039 706 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap99A0A140LIX9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap99A0A140LIX9 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
Cfap99A0A140LIX9 Gm7889-201ENSMUST00000185591 958 ntBASIC20.94■□□□□ 0.94
Cfap99A0A140LIX9 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap99A0A140LIX9 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap99A0A140LIX9 U2af2-201ENSMUST00000005041 2183 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap99A0A140LIX9 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
Cfap99A0A140LIX9 Alg5-201ENSMUST00000044567 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap99A0A140LIX9 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
Cfap99A0A140LIX9 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap99A0A140LIX9 Egln2-202ENSMUST00000108382 1756 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
Cfap99A0A140LIX9 Keap1-206ENSMUST00000216436 2498 ntAPPRIS ALT2 TSL 5 BASIC20.93■□□□□ 0.94
Cfap99A0A140LIX9 Mrpl15-203ENSMUST00000130201 1894 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap99A0A140LIX9 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC20.93■□□□□ 0.94
Cfap99A0A140LIX9 4930579K19Rik-202ENSMUST00000190541 632 ntTSL 2 BASIC20.93■□□□□ 0.94
Cfap99A0A140LIX9 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap99A0A140LIX9 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap99A0A140LIX9 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap99A0A140LIX9 Klf3-201ENSMUST00000165536 5221 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap99A0A140LIX9 Gm26860-201ENSMUST00000181674 1489 ntTSL 5 BASIC20.93■□□□□ 0.94
Cfap99A0A140LIX9 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Cfap99A0A140LIX9 Map1lc3b-204ENSMUST00000181826 2633 ntBASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Nsmf-205ENSMUST00000114386 2685 ntTSL 5 BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 P2rx2-201ENSMUST00000058016 1895 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Epn1-207ENSMUST00000208634 2127 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Gm6659-201ENSMUST00000174752 547 ntBASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Metrn-201ENSMUST00000002344 987 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Hist1h2bh-201ENSMUST00000224359 1679 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Large1-202ENSMUST00000119826 4647 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
Cfap99A0A140LIX9 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC20.92■□□□□ 0.94
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms