Protein–RNA interactions for Protein: A0A140LI48

Pcdhgb8, Protocadherin gamma subfamily B, 8, mousemouse

Predictions only

Length 931 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhgb8A0A140LI48 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb8A0A140LI48 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb8A0A140LI48 Chtop-207ENSMUST00000107346 1321 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb8A0A140LI48 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb8A0A140LI48 Ntmt1-201ENSMUST00000041830 1387 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb8A0A140LI48 Proser2-201ENSMUST00000054254 2061 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb8A0A140LI48 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb8A0A140LI48 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
Pcdhgb8A0A140LI48 Tfdp2-206ENSMUST00000185644 2646 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 4930560O18Rik-201ENSMUST00000207051 1595 ntBASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Nfatc2-205ENSMUST00000137451 2369 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Parg-208ENSMUST00000170840 2894 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Ankrd39-201ENSMUST00000001172 2109 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Dsg2-203ENSMUST00000121837 953 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Fam98c-203ENSMUST00000134176 1189 ntTSL 2 BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Gm20760-201ENSMUST00000179197 648 ntBASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Timp4-202ENSMUST00000205131 945 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 AC122769.4-201ENSMUST00000228166 901 ntBASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Gm16262-201ENSMUST00000162306 1751 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Wdr86-201ENSMUST00000068693 2364 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC15.84■□□□□ 0.13
Pcdhgb8A0A140LI48 Plekhh3-201ENSMUST00000043397 3056 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhgb8A0A140LI48 Arntl-203ENSMUST00000210074 2554 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhgb8A0A140LI48 Kank3-202ENSMUST00000172649 2652 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhgb8A0A140LI48 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Pcdhgb8A0A140LI48 Gm28265-201ENSMUST00000188201 2319 ntBASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Ube2i-213ENSMUST00000174031 824 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Ndufa12-204ENSMUST00000179990 566 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 9330154J02Rik-202ENSMUST00000185960 2557 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Ewsr1-203ENSMUST00000079949 2588 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Gm43859-201ENSMUST00000200075 1412 ntBASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Gm45906-201ENSMUST00000208911 1430 ntBASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Snx11-202ENSMUST00000107661 2197 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Adcy2-201ENSMUST00000022013 4211 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Pcdhgb8A0A140LI48 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Negr1-201ENSMUST00000041425 2095 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Cep57-208ENSMUST00000147115 2262 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Mag-203ENSMUST00000187137 2434 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Afg1l-201ENSMUST00000041024 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Sp3os-201ENSMUST00000123087 583 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Rab3c-203ENSMUST00000224180 967 ntBASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 1700018M17Rik-201ENSMUST00000052502 456 ntBASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Nfe2l1-202ENSMUST00000107657 3869 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Sar1a-201ENSMUST00000020285 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Metap1-201ENSMUST00000029804 2686 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Rab20-201ENSMUST00000033900 1392 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Dhx32-201ENSMUST00000033290 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Mrpl10-201ENSMUST00000001485 1708 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Ppm1m-203ENSMUST00000140761 1846 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Synpo-205ENSMUST00000130044 4970 ntAPPRIS P3 TSL 2 BASIC15.82■□□□□ 0.12
Pcdhgb8A0A140LI48 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Whrn-201ENSMUST00000063650 4016 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Pigt-201ENSMUST00000103101 2562 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Taz-208ENSMUST00000132437 768 ntTSL 3 BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Fbxo44-201ENSMUST00000057907 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 1810010K12Rik-201ENSMUST00000070378 1324 ntBASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Slc35f4-201ENSMUST00000074368 1931 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Hist2h2aa1-201ENSMUST00000078756 586 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Rasa2-201ENSMUST00000034984 5813 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Pcdhgb8A0A140LI48 Utp18-201ENSMUST00000066888 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 53.5 ms