Protein–RNA interactions for Protein: A0A0G2JG17

Trav23, T cell receptor alpha variable 23 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav23A0A0G2JG17 Gm22240-201ENSMUST00000175225 82 ntBASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Moap1-202ENSMUST00000178384 1284 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Sox15-201ENSMUST00000047373 861 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Mtag2-201ENSMUST00000058665 714 ntBASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Klhl36-201ENSMUST00000034287 2181 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Socs6-203ENSMUST00000125362 2814 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Gpr137-202ENSMUST00000099774 1434 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Schip1-201ENSMUST00000029346 2201 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Trav23A0A0G2JG17 Elac2-202ENSMUST00000101049 2884 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Itpripl2-201ENSMUST00000178344 6865 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Gm38308-201ENSMUST00000194934 1809 ntBASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Slc6a17-208ENSMUST00000169449 6322 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Slc6a17-201ENSMUST00000029499 6308 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC14.37□□□□□ -0.11
Trav23A0A0G2JG17 Fignl2-201ENSMUST00000178140 4206 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Chtop-203ENSMUST00000076639 1842 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Npepl1-201ENSMUST00000044415 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Amfr-201ENSMUST00000053766 3880 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 S1pr4-201ENSMUST00000053646 2386 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Ern1-203ENSMUST00000106800 654 ntTSL 3 BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Zfp783-201ENSMUST00000095946 670 ntBASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Hs6st1-201ENSMUST00000088174 3719 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Espnl-201ENSMUST00000088904 5445 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Trav23A0A0G2JG17 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Espn-208ENSMUST00000105654 1566 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Exog-202ENSMUST00000164213 2627 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Gm13158-201ENSMUST00000122007 736 ntBASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 AC163280.1-201ENSMUST00000228194 1100 ntBASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Nat8f3-201ENSMUST00000050780 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Atg16l2-202ENSMUST00000122116 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Hmga1-202ENSMUST00000117254 1328 ntAPPRIS P3 TSL 2 BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Tpd52l1-201ENSMUST00000000305 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Cadps2-212ENSMUST00000163871 4969 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Trav23A0A0G2JG17 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Plin5-202ENSMUST00000113072 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Igsf8-202ENSMUST00000085912 2182 ntAPPRIS P1 TSL 5 BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Gm11696-201ENSMUST00000070956 2765 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Pcbp1-201ENSMUST00000053015 1830 ntAPPRIS P1 BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Ngb-201ENSMUST00000021420 1616 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 A730056A06Rik-201ENSMUST00000181299 2689 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Zfp467-209ENSMUST00000114566 543 ntTSL 3 BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Tnfaip8l2-201ENSMUST00000013851 1122 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Gm18666-201ENSMUST00000190039 958 ntBASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Arhgef7-205ENSMUST00000110909 4926 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Eif4a1-213ENSMUST00000163666 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 AC121961.1-201ENSMUST00000218594 1779 ntBASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Cnpy1-201ENSMUST00000117098 2661 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Chmp6-201ENSMUST00000026434 1557 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Trav23A0A0G2JG17 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav23A0A0G2JG17 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.11
Trav23A0A0G2JG17 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Trav23A0A0G2JG17 Nrn1-203ENSMUST00000223611 1443 ntBASIC14.33□□□□□ -0.11
Trav23A0A0G2JG17 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Trav23A0A0G2JG17 Gm38345-201ENSMUST00000192635 1748 ntBASIC14.33□□□□□ -0.12
Trav23A0A0G2JG17 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.33□□□□□ -0.12
Trav23A0A0G2JG17 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC14.33□□□□□ -0.12
Trav23A0A0G2JG17 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Trav23A0A0G2JG17 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Trav23A0A0G2JG17 Tomm6-202ENSMUST00000113302 749 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms