Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Sirt7-201ENSMUST00000080202 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Mrpl12-201ENSMUST00000043627 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Dnaja3-202ENSMUST00000115854 2505 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Car11-201ENSMUST00000003360 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ankrd9-202ENSMUST00000128353 2577 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ccdc59-201ENSMUST00000020049 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Abhd10-201ENSMUST00000066983 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Tsc22d4-205ENSMUST00000110985 790 ntAPPRIS ALT2 TSL 2 BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm6420-201ENSMUST00000193885 723 ntBASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Rasl10a-201ENSMUST00000037218 1110 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Cdkl3-203ENSMUST00000109076 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 9930012K11Rik-201ENSMUST00000058240 1986 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Trpc1-204ENSMUST00000189137 4559 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Dao-201ENSMUST00000086599 1525 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ndel1-203ENSMUST00000108672 1653 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Haus8-201ENSMUST00000035960 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC12.1□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Rtn4-204ENSMUST00000102842 2257 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Efna4-201ENSMUST00000029674 1599 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm5898-201ENSMUST00000121016 2071 ntBASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm43672-201ENSMUST00000199072 1731 ntBASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Ankle1-202ENSMUST00000120725 1641 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm43294-201ENSMUST00000202850 2490 ntBASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm22325-201ENSMUST00000158904 308 ntBASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Cst3-201ENSMUST00000028938 860 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Fkbp11-201ENSMUST00000003445 731 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 H2-Ab1-201ENSMUST00000040828 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Kcnj4-201ENSMUST00000057801 2148 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Asnsd1-201ENSMUST00000027264 2442 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Stard3-201ENSMUST00000018311 2070 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Diablo-203ENSMUST00000111587 1576 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Bmt2-202ENSMUST00000203078 4462 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Lancl2-202ENSMUST00000072954 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Acp4-203ENSMUST00000118216 1454 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.47
Trav13d-4A0A0G2JFX3 Gm42417-201ENSMUST00000191849 2256 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Ephb4-203ENSMUST00000111055 4296 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Pabpn1-205ENSMUST00000141446 912 ntAPPRIS ALT2 TSL 3 BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gm8969-201ENSMUST00000199694 526 ntBASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Bend6-202ENSMUST00000115161 2231 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Nespas-203ENSMUST00000151472 2248 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Ppme1-201ENSMUST00000032963 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Gm10129-202ENSMUST00000193100 1316 ntBASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav13d-4A0A0G2JFX3 Cacna1i-202ENSMUST00000160424 9781 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms