Protein–RNA interactions for Protein: A0A0B4J1K4

Trav19, T cell receptor alpha variable 19 (Fragment), mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav19A0A0B4J1K4 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Zdhhc15-201ENSMUST00000042070 5509 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Galnt16-204ENSMUST00000218943 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Axin1-203ENSMUST00000163421 2890 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Entpd7-201ENSMUST00000081079 5911 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Cxcl14-202ENSMUST00000224801 1467 ntBASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Trav19A0A0B4J1K4 2700046G09Rik-201ENSMUST00000181612 1641 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Fosl2-201ENSMUST00000031017 6537 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 BC051019-202ENSMUST00000106735 1957 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Cfap36-201ENSMUST00000020754 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Fiz1-208ENSMUST00000208944 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Hnrnph1-201ENSMUST00000069304 2225 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Ssbp2-202ENSMUST00000042122 1633 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC13.13□□□□□ -0.31
Trav19A0A0B4J1K4 Mpped2-202ENSMUST00000111063 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Nrm-201ENSMUST00000074259 1466 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Gm45168-202ENSMUST00000206461 1069 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Pop5-201ENSMUST00000081497 1025 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Slc7a5-201ENSMUST00000045557 3517 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Kmt5b-202ENSMUST00000052699 3290 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Trav19A0A0B4J1K4 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Scube2-202ENSMUST00000106728 2890 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Dnlz-201ENSMUST00000028295 2916 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Gm21168-201ENSMUST00000199646 1096 ntBASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Nt5c-201ENSMUST00000021082 858 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Bard1-201ENSMUST00000027393 5659 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Ddx41-204ENSMUST00000224765 2199 ntBASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Hps5-202ENSMUST00000107653 4702 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Impdh1-210ENSMUST00000162739 2471 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav19A0A0B4J1K4 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Cadm3-201ENSMUST00000005470 2518 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Lin9-203ENSMUST00000192561 3160 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav19A0A0B4J1K4 Zbtb11os1-201ENSMUST00000186480 1350 ntBASIC13.1□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 47 ms