Protein–RNA interactions for Protein: A0A0B4J1K1

Trav4-3, T cell receptor alpha variable 4-3 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-3A0A0B4J1K1 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Aim2-204ENSMUST00000166137 2079 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm26580-201ENSMUST00000181002 2095 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Paip2-203ENSMUST00000115735 1521 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Psen2-202ENSMUST00000111104 1475 ntAPPRIS ALT1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 4833418N02Rik-202ENSMUST00000146560 1495 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Srm-201ENSMUST00000006611 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gpn2-202ENSMUST00000105899 996 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Pnkd-204ENSMUST00000113805 740 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 4930439D14Rik-201ENSMUST00000186765 359 ntBASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Med31-201ENSMUST00000021157 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Spcs1-204ENSMUST00000226782 949 ntBASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Samd4-211ENSMUST00000228404 3039 ntAPPRIS ALT2 BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 Prrt4-201ENSMUST00000159200 3411 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav4-3A0A0B4J1K1 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Ifnar1-202ENSMUST00000117748 2771 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm30003-201ENSMUST00000200700 1433 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Agmat-201ENSMUST00000038161 1407 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Kif21a-204ENSMUST00000109287 6124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Kif21a-205ENSMUST00000109288 6142 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Dancr-204ENSMUST00000132389 2347 ntBASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Rps14-202ENSMUST00000118551 602 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Rps7-203ENSMUST00000221871 820 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Cyc1-201ENSMUST00000023210 1194 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Map1lc3a-201ENSMUST00000029128 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 9930012K11Rik-205ENSMUST00000153871 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Prpsap1-201ENSMUST00000106391 1841 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Prr14-201ENSMUST00000033095 2402 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Trav4-3A0A0B4J1K1 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Ccnl1-201ENSMUST00000029416 2169 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Evx1-201ENSMUST00000031787 2877 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Ino80e-202ENSMUST00000106342 1840 ntTSL 3 BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Zdhhc16-201ENSMUST00000026154 1821 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Sept8-201ENSMUST00000108987 4436 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Pdgfa-204ENSMUST00000110897 1287 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Tmed5-204ENSMUST00000118036 1045 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Gm6569-201ENSMUST00000154520 811 ntAPPRIS P1 TSL 3 BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Kcnip3-202ENSMUST00000088538 1296 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Trav4-3A0A0B4J1K1 Wdr26-207ENSMUST00000162819 6619 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav4-3A0A0B4J1K1 Wasf2-201ENSMUST00000084241 5642 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav4-3A0A0B4J1K1 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav4-3A0A0B4J1K1 Pdk3-201ENSMUST00000045748 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav4-3A0A0B4J1K1 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ngly1-201ENSMUST00000022310 2935 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ndufaf1-201ENSMUST00000028768 1451 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Mdfic-202ENSMUST00000120512 1871 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Kdelr3-201ENSMUST00000010974 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gm26507-201ENSMUST00000181838 1410 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Pigs-201ENSMUST00000048073 2501 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gm11421-201ENSMUST00000122124 294 ntBASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Zfp963-202ENSMUST00000154063 640 ntTSL 3 BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Siglec15-201ENSMUST00000170760 1156 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Snx16-203ENSMUST00000195822 1084 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Hspb1-201ENSMUST00000005077 903 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Ech1-201ENSMUST00000066264 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 6330562C20Rik-201ENSMUST00000098867 784 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Trav4-3A0A0B4J1K1 Prr5l-201ENSMUST00000043845 2290 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 21 ms