Protein–RNA interactions for Protein: A0A0B4J1J9

Trav11, T cell receptor alpha variable 11 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav11A0A0B4J1J9 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Gm13429-202ENSMUST00000128242 692 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Dynlt1f-201ENSMUST00000179554 807 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Gm43017-201ENSMUST00000198296 752 ntBASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Rasl10b-201ENSMUST00000021022 996 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Mfap4-201ENSMUST00000040522 939 ntAPPRIS ALT2 TSL 2 BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 H2-Ke6-201ENSMUST00000045467 965 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Grrp1-201ENSMUST00000060050 1226 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Gm9988-201ENSMUST00000069786 435 ntBASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Cox7c-202ENSMUST00000078764 433 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Kctd17-201ENSMUST00000089414 1180 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Gata6-201ENSMUST00000047762 3194 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Rchy1-204ENSMUST00000169948 1417 ntTSL 3 BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Slc29a1-201ENSMUST00000051574 1996 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Acadvl-201ENSMUST00000018718 2020 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav11A0A0B4J1J9 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Pgm3-202ENSMUST00000072585 1920 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Tbx18-201ENSMUST00000034991 4679 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Bcar1-201ENSMUST00000166232 3142 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Rnf103-201ENSMUST00000064637 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Arhgef10-201ENSMUST00000084207 5528 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Syce3-201ENSMUST00000109314 448 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Rpusd3-204ENSMUST00000129047 1045 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Cdc34b-202ENSMUST00000188741 1252 ntBASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Gm43060-201ENSMUST00000200621 289 ntBASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Cdc34-201ENSMUST00000020550 1266 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Cdc34b-201ENSMUST00000021240 1233 ntAPPRIS P1 BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Lrch4-201ENSMUST00000031734 3078 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Rpusd3-201ENSMUST00000060634 1224 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Pstk-201ENSMUST00000075610 1135 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Pdx1-201ENSMUST00000085591 2158 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 C230012O17Rik-201ENSMUST00000130085 2999 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Tmem145-202ENSMUST00000119703 1781 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Bean1-201ENSMUST00000093245 3199 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 B4galnt4-201ENSMUST00000048002 3556 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav11A0A0B4J1J9 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Il6st-208ENSMUST00000184311 2985 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Eif5a-202ENSMUST00000070996 1373 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Mal-202ENSMUST00000028854 2778 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Thap8-201ENSMUST00000014072 1182 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Pianp-204ENSMUST00000160704 1116 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Znrf4-201ENSMUST00000052211 1236 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Fam53a-201ENSMUST00000045329 2346 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Puf60-201ENSMUST00000002599 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Camsap3-212ENSMUST00000208240 2572 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Tead3-205ENSMUST00000154873 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC12.06□□□□□ -0.48
Trav11A0A0B4J1J9 H2afx-201ENSMUST00000052686 1384 ntAPPRIS P1 BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Rnf32-204ENSMUST00000160246 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Slc27a1-207ENSMUST00000212889 2730 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Matk-202ENSMUST00000117488 1980 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Gm16712-201ENSMUST00000181962 1960 ntTSL 2 BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Dut-201ENSMUST00000051605 1950 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Pi4k2b-201ENSMUST00000031081 3139 ntAPPRIS P3 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 H2-Q7-201ENSMUST00000071951 1406 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 H2-Q7-203ENSMUST00000078205 1419 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Snrpb-201ENSMUST00000103199 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Ndufa5-201ENSMUST00000023851 875 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Bptf-201ENSMUST00000057892 11488 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Acbd6-202ENSMUST00000080138 993 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Gm43808-201ENSMUST00000202534 2065 ntBASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Usp21-202ENSMUST00000111305 2278 ntAPPRIS P2 TSL 5 BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Eif4g1-202ENSMUST00000073840 5394 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Cyp2u1-203ENSMUST00000200236 1716 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Gm6209-202ENSMUST00000194629 1506 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Parg-201ENSMUST00000022470 4413 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav11A0A0B4J1J9 Donson-201ENSMUST00000023682 2360 ntAPPRIS P2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms