Protein–RNA interactions for Protein: A0A0B4J1I1

Igkv16-104, Immunoglobulin kappa variable 16-104 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Igkv16-104A0A0B4J1I1 Zfp668-202ENSMUST00000106261 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Fst-202ENSMUST00000223640 2612 ntBASIC17.79■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Eml4-203ENSMUST00000112363 5238 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC17.79■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Il17rc-201ENSMUST00000058300 2302 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Gpr137-201ENSMUST00000025909 1717 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Actl10-202ENSMUST00000226583 1501 ntBASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Tpbgl-201ENSMUST00000178124 3022 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Tbc1d25-201ENSMUST00000039892 2648 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Pex14-201ENSMUST00000103217 2006 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Gm18958-201ENSMUST00000174258 762 ntBASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Bmp2k-202ENSMUST00000112974 3244 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Tcf7l1-201ENSMUST00000069536 3042 ntAPPRIS P3 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Ppp1r21-201ENSMUST00000038551 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Astn2-202ENSMUST00000084496 4675 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Tbkbp1-203ENSMUST00000107614 2391 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Plekha4-206ENSMUST00000211155 2044 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Vegfc-201ENSMUST00000033919 2449 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Mir8112-201ENSMUST00000184382 131 ntBASIC17.77■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Gmnn-201ENSMUST00000006898 1127 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Phox2b-201ENSMUST00000012664 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
Igkv16-104A0A0B4J1I1 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Smtnl2-201ENSMUST00000050226 2624 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gm35558-201ENSMUST00000222675 2219 ntBASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Agfg1-205ENSMUST00000187899 2078 ntTSL 5 BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Tubb4b-ps1-201ENSMUST00000179460 1336 ntBASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Nck2-201ENSMUST00000086421 2772 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Tmem263-201ENSMUST00000095383 3616 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 AW047730-202ENSMUST00000181406 2579 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gpha2-202ENSMUST00000113526 762 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gm18669-201ENSMUST00000216049 778 ntBASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gpha2-201ENSMUST00000025698 609 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Scube1-202ENSMUST00000043634 5161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Tram1-201ENSMUST00000027068 2938 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Rab11b-203ENSMUST00000173860 1544 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Sh3yl1-202ENSMUST00000110880 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 5730507C01Rik-201ENSMUST00000063216 2431 ntAPPRIS P3 TSL 1 (best) BASIC17.76■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Srsf4-202ENSMUST00000053819 2257 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Cdk5r2-201ENSMUST00000160379 2799 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Elf2-212ENSMUST00000194641 5919 ntAPPRIS P3 TSL 5 BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Sirt1-201ENSMUST00000020257 3905 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Phf14-201ENSMUST00000090632 3985 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Nme3-201ENSMUST00000024978 715 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Cldn22-201ENSMUST00000038693 995 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 AI846148-201ENSMUST00000025924 3183 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Cebpa-201ENSMUST00000042985 2626 ntAPPRIS P1 BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Hhat-203ENSMUST00000128619 1819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Sybu-208ENSMUST00000228057 3026 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Mprip-204ENSMUST00000116371 8766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gm11860-201ENSMUST00000122346 1010 ntBASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Irak1bp1-201ENSMUST00000034783 1159 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Imp3-201ENSMUST00000034827 924 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Cables2-201ENSMUST00000108891 2975 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Slc25a35-202ENSMUST00000102606 1828 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Tmem64-201ENSMUST00000062684 4670 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Lhx6-208ENSMUST00000148852 1481 ntTSL 5 BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Cenpb-201ENSMUST00000089510 4886 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Serac1-201ENSMUST00000024570 2033 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gm5414-201ENSMUST00000062879 1659 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Tnk1-202ENSMUST00000108626 1798 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Palm-202ENSMUST00000105379 2519 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Fam181a-203ENSMUST00000191218 1419 ntAPPRIS P1 TSL 5 BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Foxj1-201ENSMUST00000036215 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Vav3-201ENSMUST00000046864 5019 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Klhl33-201ENSMUST00000164415 1602 ntTSL 5 BASIC17.73■□□□□ 0.43
Igkv16-104A0A0B4J1I1 Aif1l-201ENSMUST00000001920 3117 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms