Protein–RNA interactions for Protein: A0A0B4J1G9

Trbv5, T cell receptor beta, variable 5 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv5A0A0B4J1G9 Celf6-204ENSMUST00000121266 2610 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Abhd5-204ENSMUST00000156520 3157 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Fbxl12os-202ENSMUST00000136376 2349 ntTSL 2 BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Gm11421-201ENSMUST00000122124 294 ntBASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Cdk19os-202ENSMUST00000143103 1124 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Casd1-204ENSMUST00000181734 1063 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Eml2-201ENSMUST00000048502 2275 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Phf1-201ENSMUST00000073724 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Cdc42ep3-201ENSMUST00000068958 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Crh-201ENSMUST00000061294 1320 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trbv5A0A0B4J1G9 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Gm3164-201ENSMUST00000168866 1945 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 2010016I18Rik-204ENSMUST00000190356 1562 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Gm16754-201ENSMUST00000181222 2077 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Epm2a-201ENSMUST00000069106 3287 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Dancr-204ENSMUST00000132389 2347 ntBASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Gpat3-203ENSMUST00000112887 3059 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Ptms-201ENSMUST00000032216 1149 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Sdsl-202ENSMUST00000052258 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Gm37563-201ENSMUST00000192580 1513 ntBASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Galk1-201ENSMUST00000021114 1406 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 AC165249.1-201ENSMUST00000220031 1599 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trbv5A0A0B4J1G9 Wdr41-203ENSMUST00000160115 2851 ntTSL 5 BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Spint2-201ENSMUST00000098604 1384 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Gm16401-202ENSMUST00000197463 2074 ntBASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Mlxip-202ENSMUST00000111596 2653 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Chn1-203ENSMUST00000112024 4050 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Chn1-210ENSMUST00000180045 4050 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
Trbv5A0A0B4J1G9 Umad1-202ENSMUST00000159335 2615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Nkx6-2-202ENSMUST00000106095 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Rps2-208ENSMUST00000170715 998 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Flvcr1-202ENSMUST00000191946 1216 ntBASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Sarnp-203ENSMUST00000219512 953 ntTSL 3 BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Rps2-201ENSMUST00000054289 1094 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Kcnj14-201ENSMUST00000071937 2681 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Aqp1-201ENSMUST00000004774 2627 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Trbv5A0A0B4J1G9 Sdf4-204ENSMUST00000105579 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 E230025N22Rik-201ENSMUST00000115682 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Rap1gap-202ENSMUST00000097837 3168 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Ncoa7-206ENSMUST00000215725 1445 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Zfp367-202ENSMUST00000117241 2753 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Gm12922-201ENSMUST00000120626 809 ntBASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Ctf1-204ENSMUST00000206506 784 ntTSL 2 BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 AC161180.2-201ENSMUST00000222567 1015 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Stx1a-201ENSMUST00000005509 2162 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Tm9sf1-205ENSMUST00000122358 2517 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Dbn1-202ENSMUST00000109921 2378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Trbv5A0A0B4J1G9 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms