Protein–RNA interactions for Protein: A0A0A6YWV4

Trbc1, T cell receptor beta, constant region 1 (Fragment), mousemouse

Predictions only

Length 173 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbc1A0A0A6YWV4 Fkrp-201ENSMUST00000061390 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Gm43294-201ENSMUST00000202850 2490 ntBASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Fam46c-201ENSMUST00000061455 5640 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Mycn-202ENSMUST00000130990 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Mir2861-201ENSMUST00000175539 82 ntBASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Myo1b-203ENSMUST00000114537 4618 ntTSL 5 BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Coq5-201ENSMUST00000040421 2037 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Smad5-203ENSMUST00000109876 4570 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
Trbc1A0A0A6YWV4 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
Trbc1A0A0A6YWV4 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm15743-202ENSMUST00000182690 1901 ntBASIC16.08■□□□□ 0.16
Trbc1A0A0A6YWV4 Map3k10-201ENSMUST00000036453 3682 ntAPPRIS P2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm18025-201ENSMUST00000221733 862 ntBASIC16.08■□□□□ 0.16
Trbc1A0A0A6YWV4 AC154649.1-201ENSMUST00000227392 384 ntBASIC16.08■□□□□ 0.16
Trbc1A0A0A6YWV4 Pigl-201ENSMUST00000014389 2174 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbc1A0A0A6YWV4 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbc1A0A0A6YWV4 4930519A11Rik-201ENSMUST00000181381 1523 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
Trbc1A0A0A6YWV4 Slc30a9-201ENSMUST00000113676 5648 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbc1A0A0A6YWV4 Wipf1-201ENSMUST00000094681 4728 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbc1A0A0A6YWV4 Sulf2-201ENSMUST00000088086 3927 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbc1A0A0A6YWV4 Tha1-201ENSMUST00000033230 1770 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
Trbc1A0A0A6YWV4 Mapre3-201ENSMUST00000031058 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Mon1a-201ENSMUST00000035202 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Pfn2-201ENSMUST00000066882 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Antxr1-201ENSMUST00000042025 5253 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Hmga1-205ENSMUST00000118599 529 ntAPPRIS P3 TSL 3 BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 1110046J04Rik-201ENSMUST00000147622 397 ntTSL 3 BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Vps51-209ENSMUST00000160590 840 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Nnat-206ENSMUST00000172487 404 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Ramp1-203ENSMUST00000188475 711 ntTSL 3 BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm29241-201ENSMUST00000189260 1096 ntBASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Zc3h15-201ENSMUST00000081591 2111 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Atxn7l2-202ENSMUST00000117409 2321 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Ythdc1-203ENSMUST00000120498 3269 ntAPPRIS ALT2 TSL 5 BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Atp9a-203ENSMUST00000109176 3691 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
Trbc1A0A0A6YWV4 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Crocc-211ENSMUST00000168157 6244 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 AC108858.1-201ENSMUST00000228461 1498 ntBASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Zfp467-208ENSMUST00000114564 626 ntTSL 2 BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Arl4aos-201ENSMUST00000135883 748 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Six3-203ENSMUST00000176081 3680 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Cnpy1-202ENSMUST00000118882 1984 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
Trbc1A0A0A6YWV4 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 B3gnt9-202ENSMUST00000136822 2516 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Tm7sf2-202ENSMUST00000113543 1498 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Itm2c-203ENSMUST00000185569 1465 ntTSL 5 BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Ankdd1a-201ENSMUST00000061766 1443 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Ccnd2-202ENSMUST00000201066 983 ntTSL 2 BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Tbc1d7-201ENSMUST00000021797 1239 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Cdh4-201ENSMUST00000000314 6388 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Fam57a-201ENSMUST00000094014 2130 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Pgrmc1-201ENSMUST00000073339 1857 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Hoxb4-201ENSMUST00000049241 2566 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Ankrd22-201ENSMUST00000025686 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Iqsec2-207ENSMUST00000168786 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trbc1A0A0A6YWV4 Cep68-204ENSMUST00000162811 2788 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 2410002F23Rik-217ENSMUST00000188111 2131 ntAPPRIS P2 TSL 2 BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Tle2-213ENSMUST00000146358 2749 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Atad2b-201ENSMUST00000045664 8035 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Arl1-202ENSMUST00000116234 2080 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Vsig10-201ENSMUST00000086464 2052 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trbc1A0A0A6YWV4 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Retrieved 100 of 76,532 protein–RNA pairs in 41.6 ms