Protein–RNA interactions for Protein: A0A0A6YVS4

Ighv5-9-1, Immunoglobulin heavy variable 5-9-1 (Fragment), mousemouse

Predictions only

Length 126 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ighv5-9-1A0A0A6YVS4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv5-9-1A0A0A6YVS4 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC13.15□□□□□ -0.3
Ighv5-9-1A0A0A6YVS4 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv5-9-1A0A0A6YVS4 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC13.15□□□□□ -0.3
Ighv5-9-1A0A0A6YVS4 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv5-9-1A0A0A6YVS4 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Ighv5-9-1A0A0A6YVS4 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.15□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Pacs2-207ENSMUST00000223502 3223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Insm1-201ENSMUST00000089257 3100 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Cck-204ENSMUST00000216138 799 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gabpa-201ENSMUST00000009120 4987 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Artn-202ENSMUST00000097913 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Tspan10-201ENSMUST00000044105 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Bcat2-201ENSMUST00000033098 1772 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Dhh-201ENSMUST00000023737 2363 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Anks1-202ENSMUST00000088027 6781 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gm10654-201ENSMUST00000098653 1633 ntBASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Tmem81-201ENSMUST00000058167 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Lat2-202ENSMUST00000077636 1717 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Clk4-201ENSMUST00000093132 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Dlgap2-209ENSMUST00000152652 3842 ntAPPRIS P4 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Klf16-201ENSMUST00000038558 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Efcab11-201ENSMUST00000046485 2068 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Ntng1-207ENSMUST00000131027 1485 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Ntng1-209ENSMUST00000138344 1452 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 D130020L05Rik-202ENSMUST00000220889 769 ntTSL 3 BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gm18025-201ENSMUST00000221733 862 ntBASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Tnnt2-201ENSMUST00000027671 1064 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Cadm1-201ENSMUST00000034581 1254 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Stk35-202ENSMUST00000166282 5445 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Nrxn2-203ENSMUST00000113459 3285 ntTSL 2 BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Hcn2-202ENSMUST00000099513 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Rbm11-202ENSMUST00000114249 2750 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Vat1-201ENSMUST00000040430 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Klc3-202ENSMUST00000108457 1632 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 K230015D01Rik-201ENSMUST00000211969 1516 ntBASIC13.13□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Cdk5-201ENSMUST00000030814 2059 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Ubfd1-201ENSMUST00000033158 4849 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gm45844-202ENSMUST00000209325 2450 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Fev-202ENSMUST00000159232 928 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gm3331-201ENSMUST00000183423 1017 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Theg-202ENSMUST00000077433 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Il17rb-201ENSMUST00000016110 2061 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Snx27-201ENSMUST00000029783 6261 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Ets1-201ENSMUST00000034534 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Stk3-201ENSMUST00000018476 2914 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Ccdc91-201ENSMUST00000032441 2459 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Igsf9b-201ENSMUST00000115247 2857 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC13.11□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Osbpl1a-207ENSMUST00000121808 3030 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Sncb-201ENSMUST00000036825 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Speg-203ENSMUST00000113588 1078 ntTSL 5 BASIC13.11□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gm5643-201ENSMUST00000117081 966 ntBASIC13.11□□□□□ -0.31
Ighv5-9-1A0A0A6YVS4 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 23.5 ms