Protein–RNA interactions for Protein: A0A075B6A6

Trav6n-7, T cell receptor alpha variable 6N-7 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-7A0A075B6A6 Isyna1-201ENSMUST00000019283 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Fcgrt-201ENSMUST00000003512 1770 ntAPPRIS P2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Cfap20-201ENSMUST00000034249 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Fgf22-202ENSMUST00000219228 2167 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Ptpre-207ENSMUST00000211140 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Enpp1-202ENSMUST00000105520 6777 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Klhdc8a-201ENSMUST00000046071 4269 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
Trav6n-7A0A075B6A6 Fam43b-201ENSMUST00000105032 2437 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Dixdc1-207ENSMUST00000121634 2420 ntTSL 5 BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Ppp1r9b-201ENSMUST00000038696 4508 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Nudt11-201ENSMUST00000103007 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Bcs1l-202ENSMUST00000113732 1679 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Spata2l-201ENSMUST00000098327 2380 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Atp5g1-203ENSMUST00000107686 691 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Ccdc107-202ENSMUST00000107922 865 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Snx12-204ENSMUST00000156473 1114 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Ano10-206ENSMUST00000216670 2108 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Ccdc107-201ENSMUST00000030181 817 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Pusl1-201ENSMUST00000097737 1243 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Grip1-201ENSMUST00000041962 5343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Yipf2-201ENSMUST00000034700 2174 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trav6n-7A0A075B6A6 Cers1-202ENSMUST00000140239 2711 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Arhgef9-208ENSMUST00000128565 2285 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Ankle1-201ENSMUST00000119976 2136 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Gm26885-201ENSMUST00000181920 1688 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Ctla2a-201ENSMUST00000021880 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Ncor1-203ENSMUST00000069456 3171 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Magi3-203ENSMUST00000122303 3827 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Nudt22-203ENSMUST00000180765 1073 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 C430014B12Rik-202ENSMUST00000186858 657 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Cdk2ap2-201ENSMUST00000025779 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Cbx2-201ENSMUST00000026662 3807 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Rrbp1-202ENSMUST00000037875 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Tmem79-201ENSMUST00000001456 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Camkk2-211ENSMUST00000200109 2751 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Herpud2-201ENSMUST00000008573 2781 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Por-201ENSMUST00000005651 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Acbd4-203ENSMUST00000107040 1959 ntTSL 2 BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Meg3-201ENSMUST00000124106 1988 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Adrb3-202ENSMUST00000117565 1336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Card10-202ENSMUST00000164826 4726 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Larp1b-206ENSMUST00000191872 1505 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trav6n-7A0A075B6A6 Gm27029-202ENSMUST00000107259 1855 ntAPPRIS P5 TSL 5 BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Gm45736-201ENSMUST00000210592 1352 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Lrig1-201ENSMUST00000032105 4831 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 A130051J06Rik-201ENSMUST00000180649 2618 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 5330438I03Rik-201ENSMUST00000168347 2845 ntBASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 CT010444.2-201ENSMUST00000217877 1629 ntBASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Kcmf1-206ENSMUST00000206378 544 ntTSL 5 BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Paqr7-201ENSMUST00000081525 2351 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Ciz1-201ENSMUST00000048964 2771 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Grina-201ENSMUST00000023225 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Rnf44-204ENSMUST00000125871 4292 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trav6n-7A0A075B6A6 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trav6n-7A0A075B6A6 Naxd-201ENSMUST00000033901 1359 ntTSL 2 BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms