Protein–RNA interactions for Protein: A0A075B6A4

Trav12d-3, T cell receptor alpha variable 12D-3 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12d-3A0A075B6A4 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Smarcd3-208ENSMUST00000195943 1712 ntTSL 5 BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Smarcd3-201ENSMUST00000030791 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Ola1-201ENSMUST00000028517 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Serbp1-203ENSMUST00000203077 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 D030056L22Rik-201ENSMUST00000055792 1631 ntAPPRIS P2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Rftn1-201ENSMUST00000044503 4029 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Serinc2-201ENSMUST00000105996 1878 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Cdc37l1-205ENSMUST00000224599 1769 ntBASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Zfp786-201ENSMUST00000058844 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Ppan-201ENSMUST00000004203 1670 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Cblc-201ENSMUST00000043822 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 A230050P20Rik-201ENSMUST00000043911 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Trav12d-3A0A075B6A4 Wscd1-203ENSMUST00000108511 2866 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Gas2-201ENSMUST00000051912 2181 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Ccdc84-202ENSMUST00000213813 2675 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Krt86-201ENSMUST00000088049 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Asph-210ENSMUST00000108337 2836 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Nhsl1-209ENSMUST00000207038 4854 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Agfg1-206ENSMUST00000189220 8044 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Ncoa1-201ENSMUST00000085814 7329 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Eif4e2-204ENSMUST00000113231 1119 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Pi16-201ENSMUST00000114699 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Sart1-201ENSMUST00000044207 5091 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Mink1-202ENSMUST00000072873 4610 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Tcf3-206ENSMUST00000105342 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Fam213a-202ENSMUST00000118466 1567 ntAPPRIS ALT1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Foxo3-202ENSMUST00000105501 1316 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Prkag2-203ENSMUST00000114975 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Trav12d-3A0A075B6A4 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Lrrc7-201ENSMUST00000106044 5918 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Zfp326-201ENSMUST00000031227 2667 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Hrh3-205ENSMUST00000165762 1368 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Slk-201ENSMUST00000026043 7278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Cadm1-204ENSMUST00000114548 4482 ntTSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Gm11713-201ENSMUST00000139941 523 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Gm35065-201ENSMUST00000199206 428 ntTSL 3 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Elof1-204ENSMUST00000214394 567 ntAPPRIS P1 TSL 2 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Gm35161-201ENSMUST00000221765 941 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Kcnk15-201ENSMUST00000044798 1199 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Spata33-201ENSMUST00000060133 491 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Farsa-201ENSMUST00000003906 1826 ntAPPRIS P2 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Crem-239ENSMUST00000165086 2778 ntTSL 5 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Rce1-201ENSMUST00000025823 1402 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Trim31-201ENSMUST00000078438 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Iqsec2-203ENSMUST00000112605 6017 ntAPPRIS ALT2 TSL 5 BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Sfrp1-201ENSMUST00000033952 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Chgb-201ENSMUST00000028826 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.1□□□□□ -0.31
Trav12d-3A0A075B6A4 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 App-202ENSMUST00000226232 3120 ntAPPRIS ALT2 BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Enah-202ENSMUST00000111024 3572 ntAPPRIS ALT2 TSL 5 BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 1700023F06Rik-202ENSMUST00000107026 1127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Hsd17b3-202ENSMUST00000166224 1286 ntAPPRIS P1 TSL 2 BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 5930403N24Rik-204ENSMUST00000217338 337 ntTSL 2 BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Ntsr2-202ENSMUST00000220892 846 ntTSL 3 BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Pomp-201ENSMUST00000031654 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Axin1-202ENSMUST00000118904 2833 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Avl9-201ENSMUST00000031805 6670 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Pi4kb-202ENSMUST00000107251 2895 ntTSL 1 (best) BASIC13.09□□□□□ -0.31
Trav12d-3A0A075B6A4 Mcub-201ENSMUST00000029624 1318 ntAPPRIS P1 TSL 1 (best) BASIC13.09□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 21.9 ms