Protein–RNA interactions for Protein: A0A075B699

Trav9d-1, T cell receptor alpha variable 9D-1 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-1A0A075B699 Taf9-205ENSMUST00000190594 1962 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Coil-201ENSMUST00000036649 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Lrch4-204ENSMUST00000176667 2209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Il4i1-202ENSMUST00000118125 2275 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Zfp637-201ENSMUST00000112858 650 ntTSL 2 BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Zfp637-203ENSMUST00000112860 1231 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Gm18284-201ENSMUST00000172604 624 ntBASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Ptges2-201ENSMUST00000028162 4978 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Ergic3-201ENSMUST00000006035 1377 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Krt73-201ENSMUST00000063292 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trav9d-1A0A075B699 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 St7l-202ENSMUST00000106769 2428 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Ltbp4-202ENSMUST00000108369 5377 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Atp8b1-201ENSMUST00000025482 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Zrsr2-202ENSMUST00000112289 2735 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Gm15298-201ENSMUST00000145916 1212 ntTSL 5 BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Gm42555-201ENSMUST00000199304 1039 ntBASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Gm42882-201ENSMUST00000201788 506 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 D930007J09Rik-201ENSMUST00000057911 393 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Nup85-201ENSMUST00000021085 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Pdap1-201ENSMUST00000031627 2353 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Vstm2b-203ENSMUST00000205845 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Amacr-201ENSMUST00000070877 2577 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Krt19-201ENSMUST00000007317 1576 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Zbtb32-202ENSMUST00000108151 1775 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Appl2-201ENSMUST00000020500 3020 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Racgap1-213ENSMUST00000171702 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trav9d-1A0A075B699 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.24
Trav9d-1A0A075B699 Gm26676-201ENSMUST00000181877 2226 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9d-1A0A075B699 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9d-1A0A075B699 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9d-1A0A075B699 6430573F11Rik-202ENSMUST00000135373 2573 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9d-1A0A075B699 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9d-1A0A075B699 Cdc14b-203ENSMUST00000109770 3052 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
Trav9d-1A0A075B699 Gm6211-202ENSMUST00000167849 925 ntBASIC13.52□□□□□ -0.25
Trav9d-1A0A075B699 4931413I07Rik-201ENSMUST00000173637 764 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-1A0A075B699 Gm8969-201ENSMUST00000199694 526 ntBASIC13.52□□□□□ -0.25
Trav9d-1A0A075B699 Chpt1-202ENSMUST00000073783 852 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-1A0A075B699 C1qtnf12-201ENSMUST00000024338 1315 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-1A0A075B699 Epn1-201ENSMUST00000045277 2334 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-1A0A075B699 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC13.52□□□□□ -0.25
Trav9d-1A0A075B699 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Trav9d-1A0A075B699 Fam171b-201ENSMUST00000051454 5614 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Nsmf-201ENSMUST00000006646 2922 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Dcaf12l2-201ENSMUST00000115057 2885 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Arhgef16-201ENSMUST00000030898 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Rab1a-201ENSMUST00000020358 2827 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Aire-204ENSMUST00000128241 1938 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Aire-205ENSMUST00000130972 1923 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Aire-212ENSMUST00000145975 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Aire-201ENSMUST00000019257 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Fam3c-203ENSMUST00000163963 1617 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Mcl1-202ENSMUST00000178686 858 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Camsap2-203ENSMUST00000192314 4916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Vps53-202ENSMUST00000094015 2645 ntTSL 5 BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Dzip3-202ENSMUST00000121869 5820 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Naa60-212ENSMUST00000186375 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Scly-201ENSMUST00000027532 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Zfp710-201ENSMUST00000049680 4721 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Cacna1c-216ENSMUST00000188522 7338 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Med9-201ENSMUST00000081980 1920 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Trav9d-1A0A075B699 Piezo2-201ENSMUST00000046860 2849 ntTSL 5 BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Tmem196-201ENSMUST00000058644 1678 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Tor2a-201ENSMUST00000009707 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Lrrc47-205ENSMUST00000169622 3468 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 B3galnt2-204ENSMUST00000221300 2397 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Rab6b-201ENSMUST00000035155 5007 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Rpusd3-202ENSMUST00000113092 1269 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Gm29458-201ENSMUST00000187093 354 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Gm6916-201ENSMUST00000205277 828 ntTSL 3 BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Slc7a6os-201ENSMUST00000035925 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Trav9d-1A0A075B699 Hist2h2aa2-201ENSMUST00000074976 528 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 46.4 ms