Protein–RNA interactions for Protein: A0A075B695

Trav9d-3, T cell receptor alpha variable 9D-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9d-3A0A075B695 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Gm12933-201ENSMUST00000120203 872 ntBASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Gm26524-201ENSMUST00000192339 390 ntBASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Oxld1-201ENSMUST00000044007 813 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Zfp580-201ENSMUST00000069324 1096 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Trim68-201ENSMUST00000082175 2388 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 9330111N05Rik-202ENSMUST00000181043 2449 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Usp32-202ENSMUST00000108075 7053 ntAPPRIS P1 TSL 2 BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Rnpc3-203ENSMUST00000106536 1839 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Trav9d-3A0A075B695 Galnt13-203ENSMUST00000112635 7531 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-3A0A075B695 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-3A0A075B695 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-3A0A075B695 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-3A0A075B695 Zcchc6-207ENSMUST00000225576 2499 ntBASIC12.52□□□□□ -0.4
Trav9d-3A0A075B695 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-3A0A075B695 Cyth2-201ENSMUST00000056820 2527 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-3A0A075B695 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-3A0A075B695 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-3A0A075B695 Polr2m-202ENSMUST00000163972 2138 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Trav9d-3A0A075B695 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Trav9d-3A0A075B695 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.52□□□□□ -0.41
Trav9d-3A0A075B695 Gm44210-201ENSMUST00000205253 713 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav9d-3A0A075B695 Cmtm7-204ENSMUST00000216760 665 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-3A0A075B695 Ubald1-201ENSMUST00000037843 1851 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-3A0A075B695 Nectin2-202ENSMUST00000108450 1955 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-3A0A075B695 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.52□□□□□ -0.41
Trav9d-3A0A075B695 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Trav9d-3A0A075B695 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-3A0A075B695 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Trav9d-3A0A075B695 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Pea15a-202ENSMUST00000111247 2435 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Kat14-208ENSMUST00000147747 3299 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Baiap2-202ENSMUST00000075180 3518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Nxn-201ENSMUST00000021204 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Hirip3-201ENSMUST00000037248 2766 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Mrpl52-201ENSMUST00000010550 418 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Aqp5-201ENSMUST00000088200 1376 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Gm4675-202ENSMUST00000164755 2322 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Aifm2-201ENSMUST00000067857 1442 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Arhgap8-201ENSMUST00000006029 1527 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Snx21-201ENSMUST00000056181 2590 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Ddit4-201ENSMUST00000020308 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Eml1-203ENSMUST00000109860 4160 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 C430049E01Rik-201ENSMUST00000207913 1820 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Pacsin3-215ENSMUST00000168916 1859 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Trav9d-3A0A075B695 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Krt82-201ENSMUST00000023713 2087 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Tmem51os1-202ENSMUST00000141769 2131 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Mtrf1l-201ENSMUST00000019908 2588 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Fcho2-208ENSMUST00000224992 2964 ntBASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Vac14-201ENSMUST00000034190 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Mcl1-201ENSMUST00000037947 3418 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Rell2-204ENSMUST00000163591 1057 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Sco2-201ENSMUST00000167643 1143 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Trabd-206ENSMUST00000169891 1422 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Flg-201ENSMUST00000050758 1488 ntBASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Tsc22d1-201ENSMUST00000022587 1762 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Trav9d-3A0A075B695 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-3A0A075B695 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
Trav9d-3A0A075B695 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.49□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 44.8 ms