Protein–RNA interactions for Protein: A0A075B655

Trav17, T cell receptor alpha variable 17 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav17A0A075B655 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Tssk2-201ENSMUST00000055374 1387 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Zfp691-202ENSMUST00000106355 1588 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Mtmr12-201ENSMUST00000038172 6840 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 AC122828.1-201ENSMUST00000220785 489 ntTSL 3 BASIC13.97□□□□□ -0.17
Trav17A0A075B655 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Trmt112-201ENSMUST00000088257 957 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC13.97□□□□□ -0.17
Trav17A0A075B655 A730089K16Rik-201ENSMUST00000194526 2427 ntBASIC13.97□□□□□ -0.17
Trav17A0A075B655 Pcsk5-202ENSMUST00000050715 5783 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Nrxn1-206ENSMUST00000160800 5683 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Msi2-201ENSMUST00000092794 1855 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Hmg20b-201ENSMUST00000020454 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC13.97□□□□□ -0.17
Trav17A0A075B655 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav17A0A075B655 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav17A0A075B655 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav17A0A075B655 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Trav17A0A075B655 Slc30a10-201ENSMUST00000061093 5836 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav17A0A075B655 Rnaseh1-201ENSMUST00000020959 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav17A0A075B655 Gm13234-201ENSMUST00000120010 747 ntBASIC13.96□□□□□ -0.17
Trav17A0A075B655 Kiss1-204ENSMUST00000194044 583 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trav17A0A075B655 Pkig-202ENSMUST00000099105 640 ntAPPRIS P1 TSL 2 BASIC13.96□□□□□ -0.17
Trav17A0A075B655 Ncoa5-201ENSMUST00000040381 3179 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Trav17A0A075B655 Nat8l-201ENSMUST00000056355 6529 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav17A0A075B655 Gabarap-201ENSMUST00000018711 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Trav17A0A075B655 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Cpox-201ENSMUST00000060077 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Prcc-201ENSMUST00000005015 2099 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Sptssa-201ENSMUST00000056228 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Gm44544-201ENSMUST00000207052 1844 ntBASIC13.95□□□□□ -0.18
Trav17A0A075B655 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Shank1-203ENSMUST00000107938 9826 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Gamt-201ENSMUST00000020359 979 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Rpl13-201ENSMUST00000000756 780 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Fxyd6-201ENSMUST00000085939 1788 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Zfp142-201ENSMUST00000027315 6480 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.95□□□□□ -0.18
Trav17A0A075B655 Trabd-201ENSMUST00000081702 2439 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Zdhhc24-201ENSMUST00000006632 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Gm10655-201ENSMUST00000098658 1397 ntBASIC13.95□□□□□ -0.18
Trav17A0A075B655 Spc25-202ENSMUST00000112320 1527 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Trav17A0A075B655 Cacng6-202ENSMUST00000183200 1977 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Wdtc1-201ENSMUST00000043305 4191 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Cenpa-205ENSMUST00000144742 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Cask-203ENSMUST00000115436 8260 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Lonp1-201ENSMUST00000047226 2963 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Cyyr1-204ENSMUST00000175700 1294 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Bax-205ENSMUST00000211365 801 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav17A0A075B655 AC122379.1-201ENSMUST00000220658 355 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Ckm-201ENSMUST00000003643 1235 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Pdlim5-202ENSMUST00000058626 873 ntTSL 5 BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Rpf1-203ENSMUST00000199079 1978 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Podxl2-201ENSMUST00000038409 1994 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Lsp1-204ENSMUST00000105967 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Rexo1-201ENSMUST00000057910 5250 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Ddx19a-201ENSMUST00000040416 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Ociad2-202ENSMUST00000200776 2359 ntTSL 3 BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Nelfb-201ENSMUST00000059849 2637 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Trav17A0A075B655 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Nrl-202ENSMUST00000111404 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Naf1-201ENSMUST00000118009 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Ddhd2-206ENSMUST00000211688 2265 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 1810022K09Rik-201ENSMUST00000108365 559 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Tsen2-203ENSMUST00000130425 638 ntTSL 3 BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Mrpl40-201ENSMUST00000023391 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Gpr3-201ENSMUST00000052090 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Trav17A0A075B655 Bricd5-201ENSMUST00000054946 997 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 19.5 ms