Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Pon1-201ENSMUST00000002663 1513 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Alcam-201ENSMUST00000023312 6036 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Trav5-4A0A075B652 Ino80e-201ENSMUST00000050833 1944 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Mfsd13a-201ENSMUST00000086969 2278 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Mturn-203ENSMUST00000190641 5303 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Pard3-226ENSMUST00000162907 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Tfap2c-201ENSMUST00000030391 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Snx14-205ENSMUST00000173011 2238 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Npas3-201ENSMUST00000101432 5879 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Gm2399-201ENSMUST00000104944 225 ntBASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Stmn4-203ENSMUST00000120229 1281 ntTSL 2 BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Gm10153-202ENSMUST00000210290 963 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Lrp5-202ENSMUST00000176867 2759 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Clcn2-202ENSMUST00000120099 2812 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Nsg1-201ENSMUST00000031009 2581 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Chst8-203ENSMUST00000154629 2079 ntTSL 5 BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Agxt-201ENSMUST00000027491 1553 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Trav5-4A0A075B652 Arrb2-202ENSMUST00000084954 1732 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Zswim8-201ENSMUST00000022358 6073 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Mrs2-201ENSMUST00000021772 7035 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Pacsin1-204ENSMUST00000114873 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Crebzf-201ENSMUST00000061767 3376 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Ube2b-202ENSMUST00000109086 585 ntAPPRIS P1 TSL 2 BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 AC061963.1-203ENSMUST00000213473 453 ntTSL 3 BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Nfu1-201ENSMUST00000032060 948 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Wasl-202ENSMUST00000041737 1298 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Gpaa1-210ENSMUST00000172281 1809 ntTSL 5 BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Ttc6-203ENSMUST00000172939 5782 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Rrp9-201ENSMUST00000047721 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Trav5-4A0A075B652 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Nkiras2-201ENSMUST00000017981 2097 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Lyrm4-201ENSMUST00000053265 2086 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Pigp-202ENSMUST00000113906 745 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Gm13148-201ENSMUST00000118892 745 ntBASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Dnajc19-204ENSMUST00000120805 551 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Tpra1-223ENSMUST00000204765 1738 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Zfp125-203ENSMUST00000208744 928 ntTSL 5 BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Nat8-201ENSMUST00000032073 1123 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Prrg2-201ENSMUST00000007981 1295 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Hist2h2ac-201ENSMUST00000090782 520 ntAPPRIS P1 BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Ncam2-202ENSMUST00000067602 3563 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Fam98a-201ENSMUST00000112507 2817 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Prex1-201ENSMUST00000036719 6533 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Cux1-206ENSMUST00000176172 4882 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Trav5-4A0A075B652 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Acp5-204ENSMUST00000213815 1419 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Acp5-206ENSMUST00000217643 1447 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Gm20517-202ENSMUST00000132397 4807 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Prcd-201ENSMUST00000106381 724 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 2700033N17Rik-201ENSMUST00000140185 721 ntTSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Gm20390-201ENSMUST00000170303 991 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Prmt1-205ENSMUST00000207659 945 ntTSL 5 BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Gm44549-201ENSMUST00000208351 577 ntBASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Esx1-202ENSMUST00000113066 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Idnk-204ENSMUST00000226010 1898 ntBASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Fam98b-201ENSMUST00000028825 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.61□□□□□ -0.07
Trav5-4A0A075B652 Anapc16-201ENSMUST00000020307 1379 ntTSL 2 BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 Hsf5-201ENSMUST00000093956 4158 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 Map4k5-201ENSMUST00000049239 4452 ntAPPRIS ALT1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 Gm29514-202ENSMUST00000186665 2214 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 Retreg1-201ENSMUST00000022881 3248 ntTSL 5 BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
Trav5-4A0A075B652 Xxylt1-201ENSMUST00000055389 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 54.6 ms