Protein–RNA interactions for Protein: A0A075B631

Trav9n-4, T cell receptor alpha variable 9N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav9n-4A0A075B631 Tmem80-206ENSMUST00000133012 1524 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Btbd6-202ENSMUST00000165079 1975 ntAPPRIS ALT2 TSL 3 BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Apbb1-209ENSMUST00000188368 1970 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Mark3-201ENSMUST00000075281 3321 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Gm19554-201ENSMUST00000220934 2076 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Gnas-222ENSMUST00000180362 1645 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Mtx1-201ENSMUST00000073572 1617 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Fkbp5-201ENSMUST00000079413 3542 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Baz1b-201ENSMUST00000002825 6492 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Rcn1-201ENSMUST00000006128 2720 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Kcnd3os-201ENSMUST00000130683 1091 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Ptbp3-204ENSMUST00000140925 606 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Gm4553-201ENSMUST00000168049 714 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Stard6-203ENSMUST00000168249 1167 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 1810059H22Rik-205ENSMUST00000204570 690 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Gm6365-201ENSMUST00000054711 744 ntBASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Dnajb2-201ENSMUST00000055223 1199 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Sds-201ENSMUST00000066540 1207 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Pdxdc1-202ENSMUST00000115802 2466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Ostm1-201ENSMUST00000040718 3006 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Akr1a1-201ENSMUST00000030455 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Gm13032-201ENSMUST00000151848 2001 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Git2-215ENSMUST00000178440 4944 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Git2-201ENSMUST00000043283 4938 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Ocel1-202ENSMUST00000110051 2179 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Thumpd3-201ENSMUST00000032398 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Cog2-201ENSMUST00000034460 2825 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav9n-4A0A075B631 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Setdb2-202ENSMUST00000111253 1774 ntTSL 2 BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Plppr5-202ENSMUST00000106473 4294 ntTSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Tbx2-201ENSMUST00000000095 3626 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Msl1-204ENSMUST00000107487 2836 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Adgra3-201ENSMUST00000030971 4480 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Vps4a-201ENSMUST00000034388 2178 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Zdhhc6-201ENSMUST00000076891 2263 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Kat2b-ps-201ENSMUST00000128468 2490 ntBASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Gpr84-201ENSMUST00000079824 1550 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Ppp2r5e-201ENSMUST00000021447 4810 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Trav9n-4A0A075B631 Lgmn-201ENSMUST00000021607 1990 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Glra1-201ENSMUST00000075603 2037 ntAPPRIS ALT1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Tfap2a-208ENSMUST00000224999 2058 ntAPPRIS ALT1 BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Odf2-211ENSMUST00000113767 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Best2-203ENSMUST00000209421 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Mrpl39-201ENSMUST00000116584 2294 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 4930503L19Rik-201ENSMUST00000067556 2291 ntAPPRIS P2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Fst-201ENSMUST00000022287 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Kmt5b-203ENSMUST00000113968 3216 ntAPPRIS ALT2 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Knstrn-202ENSMUST00000110842 925 ntAPPRIS ALT2 TSL 3 BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Cfl1-201ENSMUST00000116560 1148 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Fam241b-209ENSMUST00000142821 1283 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Dpyd-204ENSMUST00000149101 531 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Slc37a3-211ENSMUST00000202749 434 ntTSL 5 BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Gm4881-201ENSMUST00000206705 1152 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Tmem53-201ENSMUST00000062824 991 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Eif6-201ENSMUST00000029142 1500 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Gm44544-201ENSMUST00000207052 1844 ntBASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Rab1b-201ENSMUST00000025804 1835 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Mff-202ENSMUST00000078332 1894 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Tmco4-202ENSMUST00000050949 3318 ntAPPRIS P1 TSL 1 (best) BASIC11.99□□□□□ -0.49
Trav9n-4A0A075B631 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Dcaf8-206ENSMUST00000192704 2859 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Ckap4-202ENSMUST00000167671 2606 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Hikeshi-206ENSMUST00000153470 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Hjurp-202ENSMUST00000065420 2217 ntAPPRIS ALT2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Zfp119b-201ENSMUST00000056147 1889 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Eva1a-201ENSMUST00000042974 1773 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Mff-208ENSMUST00000160786 1645 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Lmbr1-207ENSMUST00000200564 1598 ntTSL 5 BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Gm37563-201ENSMUST00000192580 1513 ntBASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Alad-202ENSMUST00000107444 1247 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Nfe2l3-203ENSMUST00000160133 1125 ntTSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Map1lc3b-203ENSMUST00000181521 775 ntTSL 3 BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Gm42569-201ENSMUST00000200539 472 ntBASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Arv1-201ENSMUST00000034463 1165 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Rnf208-201ENSMUST00000060818 1137 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Gprc5b-201ENSMUST00000008878 4518 ntAPPRIS P3 TSL 1 (best) BASIC11.98□□□□□ -0.49
Trav9n-4A0A075B631 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC11.98□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms