Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Tm7sf2-201ENSMUST00000025713 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Acbd4-201ENSMUST00000024492 2075 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 9030624G23Rik-201ENSMUST00000101538 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gm37519-201ENSMUST00000191687 2210 ntBASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Atf7-209ENSMUST00000184485 2523 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Tcf7l2-203ENSMUST00000111646 2839 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Oxct2b-201ENSMUST00000102648 1735 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Far2os2-201ENSMUST00000149815 980 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Zfp324-204ENSMUST00000210619 447 ntTSL 3 BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Iars2-201ENSMUST00000027921 5471 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Intu-201ENSMUST00000061590 1589 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Hspbp1-201ENSMUST00000079970 1593 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Dusp9-201ENSMUST00000019701 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 D730003I15Rik-202ENSMUST00000194375 1667 ntBASIC14.96□□□□□ -0.01
Trav15d-1-dv6d-1A0A075B624 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Bub3-201ENSMUST00000084502 2218 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Pcyt2-203ENSMUST00000106188 1486 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Misp-205ENSMUST00000219305 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Gm16863-201ENSMUST00000181476 2431 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Gm15155-201ENSMUST00000112542 1009 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 1810059C17Rik-201ENSMUST00000125173 487 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Pantr1-210ENSMUST00000185599 343 ntTSL 3 BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Gm6420-201ENSMUST00000193885 723 ntBASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Jsrp1-201ENSMUST00000020435 955 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Selenos-205ENSMUST00000206575 1157 ntAPPRIS ALT1 TSL 2 BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Tradd-201ENSMUST00000034359 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Synm-205ENSMUST00000208815 2697 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Dlgap1-206ENSMUST00000133717 2355 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Lyl1-201ENSMUST00000037165 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Gm17484-201ENSMUST00000167899 2322 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Casp9-201ENSMUST00000030747 3897 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Nat9-201ENSMUST00000103038 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Cacng6-201ENSMUST00000108647 868 ntTSL 5 BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Gm13441-201ENSMUST00000140104 1168 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Nespas-201ENSMUST00000143738 1083 ntBASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Fdx1-201ENSMUST00000034552 875 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Vkorc1l1-202ENSMUST00000073945 650 ntTSL 2 BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Meox1-201ENSMUST00000057054 2228 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Rps6ka1-202ENSMUST00000105894 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Abtb1-201ENSMUST00000032169 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Gm10129-202ENSMUST00000193100 1316 ntBASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Tgfb2-201ENSMUST00000045288 5116 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Dnajb9-201ENSMUST00000015049 2461 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Lhx6-203ENSMUST00000112963 3481 ntTSL 2 BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Il1rn-201ENSMUST00000114482 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Dnaaf5-203ENSMUST00000196441 2426 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Znfx1-201ENSMUST00000048988 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Ache-201ENSMUST00000024099 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 2510002D24Rik-202ENSMUST00000123146 361 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 2300009A05Rik-201ENSMUST00000168665 595 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Neurl1b-203ENSMUST00000183077 1084 ntTSL 5 BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Gm2011-201ENSMUST00000203124 1263 ntBASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Nol7-205ENSMUST00000222499 756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Pop7-201ENSMUST00000031728 881 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Mapkapk3-201ENSMUST00000035194 2816 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Gm44544-201ENSMUST00000207052 1844 ntBASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Paqr6-204ENSMUST00000147991 1670 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Lgr6-201ENSMUST00000044828 6675 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Gm44618-201ENSMUST00000208431 2262 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Ptp4a2-201ENSMUST00000030578 3646 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Brpf1-202ENSMUST00000113119 4826 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Matk-201ENSMUST00000105328 2228 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Zfp444-202ENSMUST00000108565 849 ntTSL 3 BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Gdf15-202ENSMUST00000110103 1380 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Cxcl14-202ENSMUST00000224801 1467 ntBASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Dhfr-201ENSMUST00000022218 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Atxn7l2-204ENSMUST00000119650 2274 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Kank1-201ENSMUST00000049400 5637 ntAPPRIS P1 TSL 5 BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Bmp8a-201ENSMUST00000040496 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Gm45244-201ENSMUST00000211328 2200 ntBASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Nudt17-204ENSMUST00000200387 2108 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Mfsd10-202ENSMUST00000114329 1906 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Rae1-201ENSMUST00000029013 1742 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Trav15d-1-dv6d-1A0A075B624 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 14.6 ms