Protein–RNA interactions for Protein: A0A075B617

Trav16d-dv11, T cell receptor alpha variable 16D-DV11 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16d-dv11A0A075B617 Lrrtm1-202ENSMUST00000159616 2541 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm12356-201ENSMUST00000122854 353 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Epb41l4aos-201ENSMUST00000146010 430 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Usf2-211ENSMUST00000172417 648 ntTSL 5 BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 H2-Q5-202ENSMUST00000172979 998 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm26548-201ENSMUST00000181165 2029 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Camkk2-202ENSMUST00000196742 1084 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm4553-202ENSMUST00000210925 1044 ntAPPRIS P5 BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Tdh-201ENSMUST00000022522 1881 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Gbe1-206ENSMUST00000170464 2736 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Mag-201ENSMUST00000040548 2419 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Cops8-201ENSMUST00000036153 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Slc44a1-201ENSMUST00000102911 3102 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Ptpn5-201ENSMUST00000033142 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Rab27b-202ENSMUST00000117692 2842 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Timm17b-201ENSMUST00000033498 2381 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Trav16d-dv11A0A075B617 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Ric3-202ENSMUST00000120876 1633 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Stx4a-201ENSMUST00000033075 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Plpp6-201ENSMUST00000045674 2859 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Ikbip-202ENSMUST00000020150 1328 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Rassf1-201ENSMUST00000010211 1727 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Ltb4r2-201ENSMUST00000044554 1439 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Trip10-201ENSMUST00000019631 2224 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm26558-201ENSMUST00000180559 861 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Bag1-201ENSMUST00000030125 1295 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Scn1b-203ENSMUST00000211945 1501 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Sco1-201ENSMUST00000092996 2412 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Lrrc43-202ENSMUST00000121444 2016 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Nt5c3b-204ENSMUST00000107398 1635 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Rbbp7-203ENSMUST00000112327 1862 ntTSL 5 BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 Rdh14-201ENSMUST00000020947 1480 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Trav16d-dv11A0A075B617 A930003O13Rik-203ENSMUST00000199056 1955 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Rmdn3-201ENSMUST00000094695 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Htra2-202ENSMUST00000113962 1305 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Ltbp1-201ENSMUST00000001927 6671 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Apbb1-219ENSMUST00000191601 2690 ntAPPRIS P4 TSL 5 BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Rsph3a-201ENSMUST00000097423 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Crtap-201ENSMUST00000084881 1674 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Ttc39a-201ENSMUST00000064129 2356 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Erlin1-201ENSMUST00000071698 3228 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 C230062I16Rik-202ENSMUST00000207746 1022 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Tasp1-201ENSMUST00000046656 2480 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Slc7a10-201ENSMUST00000001854 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Trav16d-dv11A0A075B617 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav16d-dv11A0A075B617 Lrig3-201ENSMUST00000074807 4016 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Trav16d-dv11A0A075B617 Rhpn2-201ENSMUST00000032705 3508 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Tapt1-201ENSMUST00000055128 3513 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Atg4c-201ENSMUST00000030279 3178 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Rhot2-201ENSMUST00000043897 3189 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Txndc5-201ENSMUST00000035988 2843 ntAPPRIS P3 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Dnm1-216ENSMUST00000201494 2732 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Emc6-202ENSMUST00000108480 563 ntAPPRIS P1 TSL 2 BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Gm16076-201ENSMUST00000140116 480 ntTSL 3 BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Josd2-218ENSMUST00000206887 693 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 2610035D17Rik-201ENSMUST00000127263 1861 ntTSL 5 BASIC12.89□□□□□ -0.35
Trav16d-dv11A0A075B617 Dlgap1-209ENSMUST00000140728 2173 ntAPPRIS ALT2 TSL 5 BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Dleu2-208ENSMUST00000182768 1442 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 1700065D16Rik-204ENSMUST00000189348 1540 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Ripply3-201ENSMUST00000023660 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Cdc25a-201ENSMUST00000094324 3632 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Tmed4-201ENSMUST00000004508 2003 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Snap91-204ENSMUST00000098495 4150 ntAPPRIS P4 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Cdh4-203ENSMUST00000108911 1208 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Fam168b-208ENSMUST00000191307 844 ntTSL 2 BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 AC158777.2-201ENSMUST00000228787 398 ntAPPRIS P1 BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Igfbp6-201ENSMUST00000023807 1112 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Fbxo2-201ENSMUST00000047951 1288 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Trav16d-dv11A0A075B617 Gm9959-201ENSMUST00000068277 390 ntBASIC12.88□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 21.3 ms