Protein–RNA interactions for Protein: A0A075B606

Trav13d-1, T cell receptor alpha variable 13D-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-1A0A075B606 Ddx59-201ENSMUST00000027655 2166 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Espn-211ENSMUST00000105657 1375 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Gm43702-201ENSMUST00000198772 2546 ntBASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Mir1199-201ENSMUST00000117015 119 ntBASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Gm715-201ENSMUST00000117865 831 ntBASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Gm14321-201ENSMUST00000127441 632 ntTSL 3 BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 4932443I19Rik-204ENSMUST00000214337 1212 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 2810004N23Rik-201ENSMUST00000034465 2340 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Dock3-201ENSMUST00000044532 9063 ntAPPRIS P1 TSL 2 BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Aldh7a1-206ENSMUST00000172734 1880 ntTSL 5 BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Rab5c-202ENSMUST00000107364 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Pomgnt2-207ENSMUST00000217610 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Trav13d-1A0A075B606 Gm26689-201ENSMUST00000180927 1818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Gm26553-201ENSMUST00000181531 1818 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Arhgef19-201ENSMUST00000006618 3414 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Gfra3-201ENSMUST00000025224 1992 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Fam131b-201ENSMUST00000031891 4065 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Rbm33-204ENSMUST00000114884 6256 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Gm1673-203ENSMUST00000114383 511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Gm15375-201ENSMUST00000119510 849 ntBASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Gm16127-201ENSMUST00000131619 234 ntTSL 5 BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 2510002D24Rik-201ENSMUST00000055413 1281 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Mrps12-201ENSMUST00000056078 722 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Gm5464-201ENSMUST00000100453 2156 ntAPPRIS P1 BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Wt1-205ENSMUST00000143043 3090 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Rtkn-203ENSMUST00000121093 2597 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Klhl31-201ENSMUST00000057781 6494 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Swsap1-201ENSMUST00000053583 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Klhdc1-201ENSMUST00000063445 2620 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Dpys-202ENSMUST00000110306 2110 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Trav13d-1A0A075B606 Bmp8a-202ENSMUST00000102641 1917 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Laptm4b-201ENSMUST00000022867 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Sh3bp1-202ENSMUST00000061239 1917 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Pea15a-201ENSMUST00000013842 2501 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Eif4g3-201ENSMUST00000058133 2663 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 AL672049.1-201ENSMUST00000197943 91 ntBASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Uchl1-201ENSMUST00000031131 1177 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Mag-207ENSMUST00000191081 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 0610040J01Rik-201ENSMUST00000081747 2008 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Tbc1d9b-202ENSMUST00000101270 5213 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Zfp623-201ENSMUST00000037260 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Espn-206ENSMUST00000103196 1323 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Sh2b2-204ENSMUST00000196447 1783 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC12.84□□□□□ -0.35
Trav13d-1A0A075B606 Myo5a-214ENSMUST00000155282 6372 ntAPPRIS P5 TSL 5 BASIC12.83□□□□□ -0.35
Trav13d-1A0A075B606 Zfp382-201ENSMUST00000098596 2117 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
Trav13d-1A0A075B606 Cyb5a-204ENSMUST00000160180 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 1700018L02Rik-201ENSMUST00000187897 2485 ntBASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Rnf112-203ENSMUST00000102661 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Lpin2-213ENSMUST00000156570 1586 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Atp5d-203ENSMUST00000105367 1410 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Ikzf5-203ENSMUST00000128432 714 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Gm16475-201ENSMUST00000207306 512 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Arfip2-212ENSMUST00000209550 1141 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Arfip2-214ENSMUST00000210911 938 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Hebp1-201ENSMUST00000045855 1058 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 4930540M05Rik-201ENSMUST00000180527 2068 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Nr1h2-202ENSMUST00000107910 1948 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Anks1b-208ENSMUST00000182053 1649 ntTSL 5 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Slc5a10-201ENSMUST00000051552 2261 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Prkaca-201ENSMUST00000005606 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Col11a2-203ENSMUST00000114255 5722 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Asb1-202ENSMUST00000086843 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Commd7-202ENSMUST00000109782 1343 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Htr6-202ENSMUST00000105802 2341 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Ttc13-201ENSMUST00000041614 3038 ntTSL 2 BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Agfg2-201ENSMUST00000031736 2893 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Rbl2-201ENSMUST00000034091 4925 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
Trav13d-1A0A075B606 Tfdp2-209ENSMUST00000188750 1713 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
Trav13d-1A0A075B606 Gm19439-201ENSMUST00000198195 2273 ntBASIC12.82□□□□□ -0.36
Trav13d-1A0A075B606 Gpr137b-ps-203ENSMUST00000220758 1942 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Trav13d-1A0A075B606 Isca1-201ENSMUST00000057115 1942 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms