Protein–RNA interactions for Protein: A0A075B5Z7

Trav5-1, T cell receptor alpha variable 5-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-1A0A075B5Z7 Htra3-202ENSMUST00000114233 1901 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Camk2b-202ENSMUST00000019133 2223 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Polr3d-201ENSMUST00000000793 2016 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Shc3-201ENSMUST00000021898 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Nptxr-203ENSMUST00000175858 4948 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm12085-201ENSMUST00000119263 940 ntBASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm16120-201ENSMUST00000127990 808 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm20472-201ENSMUST00000174403 1240 ntBASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Cpne1-217ENSMUST00000184265 871 ntTSL 5 BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm38027-201ENSMUST00000192315 235 ntBASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Nr1d2-201ENSMUST00000090543 4663 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Mex3d-201ENSMUST00000105350 3266 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Wnt10b-203ENSMUST00000226610 2217 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Nsun2-202ENSMUST00000109699 2834 ntAPPRIS P2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Erc1-202ENSMUST00000079582 2304 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Phf20l1-201ENSMUST00000048188 6670 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Trav5-1A0A075B5Z7 Wnt6-201ENSMUST00000006716 2071 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
Trav5-1A0A075B5Z7 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC15.08■□□□□ 0.01
Trav5-1A0A075B5Z7 Hmces-202ENSMUST00000113606 1572 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Galk2-202ENSMUST00000094604 1928 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Tsfm-202ENSMUST00000120547 1271 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Ndufa12-201ENSMUST00000020209 1110 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Snapc3-202ENSMUST00000071544 942 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Gm11373-201ENSMUST00000129791 2819 ntTSL 5 BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Camsap3-207ENSMUST00000207712 2539 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Scarb1-201ENSMUST00000086075 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Cacnb1-204ENSMUST00000107561 1778 ntTSL 1 (best) BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Ssc4d-203ENSMUST00000111152 2745 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Lrrc14-202ENSMUST00000127208 4849 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
Trav5-1A0A075B5Z7 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Eif3b-201ENSMUST00000100507 2945 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Zfp697-202ENSMUST00000178372 4703 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Fgf11-201ENSMUST00000011285 2534 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Kcnb1-201ENSMUST00000059826 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Fam126a-202ENSMUST00000101513 1679 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 4930426D05Rik-202ENSMUST00000139804 1650 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Fxyd6-203ENSMUST00000217381 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Gm15565-201ENSMUST00000118890 427 ntBASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Gm24841-201ENSMUST00000158676 357 ntBASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Rac1-202ENSMUST00000100489 2325 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Gm2788-202ENSMUST00000147173 1390 ntTSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Ythdc1-202ENSMUST00000119339 3222 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Mex3a-201ENSMUST00000172699 5778 ntAPPRIS P1 TSL 2 BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Plekhf1-201ENSMUST00000098513 5263 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
Trav5-1A0A075B5Z7 Apaf1-208ENSMUST00000162618 5151 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Gm11549-201ENSMUST00000124606 2829 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Dlgap2-203ENSMUST00000133298 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Arhgef17-204ENSMUST00000209041 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Hilpda-202ENSMUST00000115289 658 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Gapdh-202ENSMUST00000117757 1273 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 2210408F21Rik-213ENSMUST00000153057 652 ntTSL 3 BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Prr23a1-201ENSMUST00000170349 883 ntAPPRIS P1 BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Anapc13-203ENSMUST00000188398 727 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Bax-201ENSMUST00000033093 867 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Man2a2-201ENSMUST00000098346 6554 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Hnrnph3-201ENSMUST00000020263 2213 ntAPPRIS P3 TSL 5 BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Tra2a-204ENSMUST00000204189 1777 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Trav5-1A0A075B5Z7 Csf1-203ENSMUST00000120243 2097 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
Trav5-1A0A075B5Z7 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC15.05■□□□□ 0
Trav5-1A0A075B5Z7 Phldb3-201ENSMUST00000073325 2273 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
Trav5-1A0A075B5Z7 Dmrt2-201ENSMUST00000053068 2347 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav5-1A0A075B5Z7 Pomgnt2-201ENSMUST00000084743 2365 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav5-1A0A075B5Z7 Psme3-201ENSMUST00000019470 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav5-1A0A075B5Z7 Mplkip-201ENSMUST00000049744 2672 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav5-1A0A075B5Z7 Tal1-204ENSMUST00000162489 2894 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav5-1A0A075B5Z7 Krt77-201ENSMUST00000087996 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Trav5-1A0A075B5Z7 3110043O21Rik-203ENSMUST00000108127 3193 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Jade1-202ENSMUST00000163764 5584 ntTSL 1 (best) BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Gm37025-201ENSMUST00000195159 829 ntBASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Gm35240-201ENSMUST00000218335 661 ntTSL 2 BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Mpst-203ENSMUST00000169133 1309 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Ppp2r1b-205ENSMUST00000175640 1523 ntTSL 5 BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Nos1ap-207ENSMUST00000161966 1607 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Sept4-205ENSMUST00000107962 1678 ntAPPRIS ALT1 TSL 5 BASIC15.05■□□□□ -0
Trav5-1A0A075B5Z7 Pced1a-202ENSMUST00000110277 1689 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms