Protein–RNA interactions for Protein: A0A075B5I2

Trbv4, T cell receptor beta, variable 10 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv4A0A075B5I2 Gm18025-201ENSMUST00000221733 862 ntBASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 1700028I16Rik-201ENSMUST00000076984 1048 ntTSL 5 BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Ick-201ENSMUST00000009972 873 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Tspan4-201ENSMUST00000026585 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Krt12-201ENSMUST00000017741 1852 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Mterf1a-202ENSMUST00000117463 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Prdm6-201ENSMUST00000091900 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
Trbv4A0A075B5I2 Negr1-202ENSMUST00000074015 4983 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Sec1-201ENSMUST00000040636 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Guca1b-202ENSMUST00000145462 1556 ntTSL 2 BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Nanp-201ENSMUST00000066640 1394 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Gabarapl1-202ENSMUST00000204487 902 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 AC166341.7-201ENSMUST00000221698 126 ntBASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Ift74-201ENSMUST00000030311 2139 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
Trbv4A0A075B5I2 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv4A0A075B5I2 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv4A0A075B5I2 Ccdc105-201ENSMUST00000105383 1714 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv4A0A075B5I2 Meis2-202ENSMUST00000074285 2844 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv4A0A075B5I2 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv4A0A075B5I2 Snx15-201ENSMUST00000025702 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv4A0A075B5I2 Blmh-201ENSMUST00000021197 2497 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
Trbv4A0A075B5I2 Fgf4-201ENSMUST00000060336 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 Tpm1-204ENSMUST00000113684 887 ntTSL 5 BASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 Pigp-203ENSMUST00000113910 966 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 Trmt13-210ENSMUST00000198454 880 ntBASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 Fiz1-202ENSMUST00000165320 2653 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 Slc39a10-201ENSMUST00000027131 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
Trbv4A0A075B5I2 Gna11-201ENSMUST00000043604 3414 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Fxr1-201ENSMUST00000001620 2459 ntTSL 5 BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Vangl2-203ENSMUST00000111264 2349 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Gtf2a2-204ENSMUST00000119905 622 ntTSL 2 BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Gm18666-201ENSMUST00000190039 958 ntBASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Gm42545-201ENSMUST00000202755 922 ntBASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Kcnn4-203ENSMUST00000205626 461 ntTSL 5 BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Hist1h2ap-201ENSMUST00000081342 482 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Plppr2-201ENSMUST00000046371 2626 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Nipsnap3b-201ENSMUST00000015391 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Auh-202ENSMUST00000110031 3235 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Rprd1b-207ENSMUST00000152452 1910 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Dennd6a-201ENSMUST00000037585 6638 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Trbv4A0A075B5I2 Mmp28-201ENSMUST00000021020 2311 ntAPPRIS P4 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Wnk2-205ENSMUST00000110097 6882 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Wnk2-203ENSMUST00000091623 6897 ntAPPRIS P4 TSL 5 BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Ece2-202ENSMUST00000122306 2495 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Card10-203ENSMUST00000170584 3220 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Gm20635-201ENSMUST00000176473 1287 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 4930467K11Rik-201ENSMUST00000180831 723 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Atp5c1-201ENSMUST00000026887 1060 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Mrgprf-202ENSMUST00000117718 1935 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Ddx28-201ENSMUST00000058579 2262 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 A430057M04Rik-202ENSMUST00000170150 2176 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Rfx7-201ENSMUST00000093820 7988 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Zscan25-201ENSMUST00000094116 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Camta1-204ENSMUST00000105670 4961 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Sdc3-201ENSMUST00000070478 4973 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Trbv4A0A075B5I2 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
Trbv4A0A075B5I2 Frmd5-203ENSMUST00000121219 2262 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv4A0A075B5I2 Josd2-204ENSMUST00000118628 864 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
Trbv4A0A075B5I2 Rabac1-203ENSMUST00000205871 986 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv4A0A075B5I2 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC17.55■□□□□ 0.4
Trbv4A0A075B5I2 Josd2-201ENSMUST00000035844 930 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv4A0A075B5I2 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv4A0A075B5I2 Icmt-201ENSMUST00000048892 4919 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv4A0A075B5I2 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv4A0A075B5I2 Mfsd13a-202ENSMUST00000128041 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Trbv4A0A075B5I2 5031425F14Rik-201ENSMUST00000127920 2098 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv4A0A075B5I2 Ecel1-204ENSMUST00000161002 3033 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv4A0A075B5I2 9330160F10Rik-201ENSMUST00000101007 2766 ntBASIC17.54■□□□□ 0.4
Trbv4A0A075B5I2 Papola-203ENSMUST00000163473 2544 ntTSL 5 BASIC17.54■□□□□ 0.4
Trbv4A0A075B5I2 Gm15635-204ENSMUST00000208024 2539 ntBASIC17.54■□□□□ 0.4
Trbv4A0A075B5I2 Foxa3-201ENSMUST00000036018 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Trbv4A0A075B5I2 1600023N17Rik-201ENSMUST00000196242 1007 ntBASIC17.54■□□□□ 0.4
Trbv4A0A075B5I2 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.54■□□□□ 0.4
Trbv4A0A075B5I2 2810408A11Rik-201ENSMUST00000018714 1485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms