Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Olfr694-204ENSMUST00000216895 4853 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm6205-202ENSMUST00000190001 2515 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Olfr1270-202ENSMUST00000213946 4930 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm4788-202ENSMUST00000111986 2935 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Cftr-203ENSMUST00000115406 4341 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Igkv1-35-201ENSMUST00000103374 359 ntAPPRIS ALT2 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm24067-201ENSMUST00000104514 85 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm6754-201ENSMUST00000117124 913 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm12520-201ENSMUST00000117493 316 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Rpl27-ps2-201ENSMUST00000120378 399 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Clec2f-201ENSMUST00000121051 374 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm25116-201ENSMUST00000157191 122 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm17133-201ENSMUST00000170636 289 ntTSL 3 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Trav12-2-201ENSMUST00000180972 426 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Mir7056-201ENSMUST00000183776 59 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm21856-201ENSMUST00000187547 696 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm21735-201ENSMUST00000190360 696 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 4930420N18Rik-201ENSMUST00000191831 676 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm44003-201ENSMUST00000203024 490 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm43893-201ENSMUST00000203362 437 ntTSL 3 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Olfr1492-ps1-201ENSMUST00000207071 865 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm18877-201ENSMUST00000207706 539 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 AC163621.2-201ENSMUST00000222229 682 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Ap3m1-208ENSMUST00000224016 764 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 AC102542.1-201ENSMUST00000225204 1138 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 U90926-201ENSMUST00000031356 520 ntAPPRIS ALT2 TSL 5 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Xlr4b-203ENSMUST00000081827 1077 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm26072-201ENSMUST00000083135 107 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Vmn1r183-201ENSMUST00000086012 918 ntAPPRIS P1 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Eif1-ps1-201ENSMUST00000086606 330 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Znf41-ps-201ENSMUST00000122051 2413 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Olfr992-202ENSMUST00000213749 2150 ntAPPRIS P1 TSL 5 BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm28154-201ENSMUST00000186267 4218 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm28940-201ENSMUST00000187929 1682 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Gm7195-201ENSMUST00000190869 1707 ntBASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Dram2-201ENSMUST00000029507 1891 ntTSL 1 (best) BASIC4.18□□□□□ -1.74
Lima1Q9ERG0 Dnah7a-201ENSMUST00000094964 12245 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 C230031I18Rik-201ENSMUST00000197856 3698 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Zfp850-203ENSMUST00000180502 6163 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Ankar-201ENSMUST00000053499 4571 ntAPPRIS P3 TSL 1 (best) BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm22473-201ENSMUST00000104114 132 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Xlr5a-202ENSMUST00000114520 867 ntAPPRIS P1 TSL 3 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm12287-201ENSMUST00000119770 707 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm11866-201ENSMUST00000120209 335 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm14618-201ENSMUST00000149377 740 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Nell1os-203ENSMUST00000152166 410 ntTSL 2 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm15230-201ENSMUST00000153701 510 ntTSL 2 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm16589-201ENSMUST00000159522 918 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm6650-201ENSMUST00000166710 614 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm8362-202ENSMUST00000170673 997 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm27387-201ENSMUST00000184583 116 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm27690-201ENSMUST00000184596 126 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm6057-201ENSMUST00000195927 314 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm8861-201ENSMUST00000196346 832 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm8458-201ENSMUST00000196658 819 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Trav7-5-201ENSMUST00000200609 337 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Clec2g-205ENSMUST00000203405 967 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 AC154738.2-201ENSMUST00000227403 1110 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Olfr813-201ENSMUST00000064893 933 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Olfr677-201ENSMUST00000098161 939 ntAPPRIS P1 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Frmpd3-201ENSMUST00000044702 3141 ntTSL 1 (best) BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Gm38269-201ENSMUST00000194549 3298 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Syne1-205ENSMUST00000215295 27908 ntAPPRIS P1 TSL 5 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Cntn3-201ENSMUST00000032159 5183 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Olfr711-201ENSMUST00000051715 3035 ntAPPRIS P1 TSL 2 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Olfr819-202ENSMUST00000216322 3930 ntAPPRIS ALT2 TSL 5 BASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Synpr-207ENSMUST00000223583 3362 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 AC156560.3-201ENSMUST00000222978 3841 ntBASIC4.17□□□□□ -1.74
Lima1Q9ERG0 Olfr235-202ENSMUST00000207969 2447 ntAPPRIS P1 TSL 3 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Mup6-201ENSMUST00000107517 926 ntAPPRIS P1 TSL 5 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Nectin3-204ENSMUST00000119941 529 ntTSL 3 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm5060-201ENSMUST00000120072 599 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm12237-201ENSMUST00000120158 470 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Dnajc19-ps-201ENSMUST00000120890 351 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm12288-201ENSMUST00000121054 1282 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm13808-201ENSMUST00000121353 184 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Klra11-ps-201ENSMUST00000122033 810 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm13874-201ENSMUST00000130680 809 ntTSL 5 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm12724-201ENSMUST00000140196 665 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Zakit-201ENSMUST00000157677 308 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm21820-201ENSMUST00000179056 1083 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm21960-201ENSMUST00000181924 452 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm8502-201ENSMUST00000185708 901 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm21147-201ENSMUST00000186046 913 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm19503-201ENSMUST00000187109 241 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm23925-202ENSMUST00000188429 132 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm38046-201ENSMUST00000192733 550 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Fbxw27-201ENSMUST00000197125 810 ntAPPRIS P2 TSL 3 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm43678-201ENSMUST00000197774 328 ntTSL 3 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm45651-201ENSMUST00000210857 335 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Olfr367-ps-203ENSMUST00000213819 541 ntTSL 3 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 AC133207.3-201ENSMUST00000217694 464 ntTSL 3 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 AC158641.1-201ENSMUST00000218933 229 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Gm46190-201ENSMUST00000219650 427 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 AC162376.1-201ENSMUST00000220120 435 ntBASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Cypt3-201ENSMUST00000056754 666 ntAPPRIS P3 TSL 1 (best) BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Lima1Q9ERG0 Olfr866-201ENSMUST00000062248 1077 ntAPPRIS P1 BASIC4.16□□□□□ -1.74
Retrieved 100 of 76,532 protein–RNA pairs in 63.1 ms