Protein–RNA interactions for Protein: Q9CWY9

Rpain, RPA-interacting protein, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RpainQ9CWY9 Mir6341-201ENSMUST00000183490 121 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm29124-201ENSMUST00000186576 452 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm29053-201ENSMUST00000187484 370 ntTSL 5 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm29634-201ENSMUST00000188467 696 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm28699-201ENSMUST00000189193 696 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 1810006J02Rik-202ENSMUST00000191060 523 ntTSL 2 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Trbv24-201ENSMUST00000194614 347 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 1700065J11Rik-201ENSMUST00000201560 424 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm44079-201ENSMUST00000204889 529 ntTSL 5 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm44997-202ENSMUST00000205970 425 ntTSL 3 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm44754-201ENSMUST00000208155 400 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm4756-203ENSMUST00000208307 798 ntTSL 3 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm6145-203ENSMUST00000210557 835 ntTSL 5 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Mbd3l1-202ENSMUST00000213625 823 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RpainQ9CWY9 AC109212.1-201ENSMUST00000215561 427 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 AC127279.1-201ENSMUST00000220140 637 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 AC115750.1-201ENSMUST00000220441 567 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 AC154426.1-201ENSMUST00000225614 1132 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 Cetn2-201ENSMUST00000033713 1026 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Olfr136-201ENSMUST00000077203 939 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Clec4a4-201ENSMUST00000079379 776 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm23407-201ENSMUST00000082538 91 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm24254-201ENSMUST00000083702 104 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 Vmn1r86-201ENSMUST00000094828 951 ntAPPRIS P2 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Ube2v2-201ENSMUST00000096234 609 ntTSL 3 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 4930432M17Rik-201ENSMUST00000098646 525 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Kynu-201ENSMUST00000028223 2733 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RpainQ9CWY9 AC127371.2-201ENSMUST00000228108 1933 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 Zfp37-207ENSMUST00000222748 2564 ntAPPRIS ALT2 TSL 2 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Cnot2-213ENSMUST00000169921 2120 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm40621-202ENSMUST00000217378 1470 ntTSL 5 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 AY358078-201ENSMUST00000053821 1461 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm37628-201ENSMUST00000194644 5440 ntBASIC5.69□□□□□ -1.5
RpainQ9CWY9 Trps1-202ENSMUST00000165201 9859 ntAPPRIS P3 TSL 1 (best) BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gcnt3-201ENSMUST00000034751 4301 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Olfr1348-207ENSMUST00000209029 2696 ntAPPRIS P1 TSL 5 BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
RpainQ9CWY9 Gm35629-201ENSMUST00000209684 2241 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Tc2n-202ENSMUST00000160715 1386 ntTSL 5 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Zfhx4-205ENSMUST00000176383 13500 ntAPPRIS P2 TSL 5 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Abca13-201ENSMUST00000042740 16011 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Zfp120-203ENSMUST00000109931 4033 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Amy2a5-201ENSMUST00000098673 3715 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm13100-201ENSMUST00000117157 1439 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm22592-201ENSMUST00000104242 131 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Mir465c-2-201ENSMUST00000104757 81 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm5751-201ENSMUST00000115561 444 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm13866-201ENSMUST00000118901 968 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm14307-201ENSMUST00000118930 291 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm7916-201ENSMUST00000120325 456 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm14297-201ENSMUST00000129110 291 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm22945-201ENSMUST00000158557 157 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Vmn1r-ps64-201ENSMUST00000173746 655 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm20888-201ENSMUST00000178934 567 ntTSL 5 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm15099-201ENSMUST00000179833 573 ntTSL 5 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm21171-201ENSMUST00000180048 673 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm6717-201ENSMUST00000185549 838 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 1700028M03Rik-201ENSMUST00000185938 476 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
RpainQ9CWY9 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm18900-201ENSMUST00000193218 584 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm18340-201ENSMUST00000196342 609 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 2810432F15Rik-201ENSMUST00000198632 657 ntTSL 5 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm43054-201ENSMUST00000199495 884 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm2314-201ENSMUST00000200391 586 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm8774-201ENSMUST00000203621 692 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Olfr1353-202ENSMUST00000204849 1015 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm45700-201ENSMUST00000205866 347 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm44991-201ENSMUST00000208669 479 ntTSL 3 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 AC108401.1-201ENSMUST00000219740 361 ntTSL 3 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm4263-201ENSMUST00000220693 1101 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gstz1-204ENSMUST00000222222 724 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Reg3g-201ENSMUST00000032089 771 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Cr2-201ENSMUST00000043104 1044 ntTSL 5 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Olfr623-201ENSMUST00000068531 1075 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Olfr1148-201ENSMUST00000077580 945 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 n-R5s88-201ENSMUST00000083173 118 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Mir465c-1-201ENSMUST00000093560 81 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Olfr592-201ENSMUST00000098207 939 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Olfr518-202ENSMUST00000217803 2994 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Akap4-202ENSMUST00000115750 3021 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Pate3-201ENSMUST00000178236 1329 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
RpainQ9CWY9 Gm37760-201ENSMUST00000194726 3841 ntBASIC5.68□□□□□ -1.5
RpainQ9CWY9 Ptprd-217ENSMUST00000174023 4530 ntTSL 5 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 AC115970.1-201ENSMUST00000218910 1758 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm44829-201ENSMUST00000208008 3193 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Gm38299-201ENSMUST00000193214 3789 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Kcnt2-201ENSMUST00000119786 3624 ntTSL 5 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
RpainQ9CWY9 Vmn1r184-206ENSMUST00000228145 5888 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
RpainQ9CWY9 A430027C01Rik-201ENSMUST00000194599 1644 ntBASIC5.67□□□□□ -1.5
RpainQ9CWY9 Sirpb1b-202ENSMUST00000192382 1437 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 76,532 protein–RNA pairs in 95.3 ms