Protein–RNA interactions for Protein: Q99MA9

Nkx6-1, Homeobox protein Nkx-6.1, mousemouse

Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx6-1Q99MA9 Gm4989-201ENSMUST00000118711 749 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm7071-201ENSMUST00000120458 462 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm15044-201ENSMUST00000120703 598 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm14362-201ENSMUST00000121679 273 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 4933416I08Rik-201ENSMUST00000125315 703 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Smyd1-204ENSMUST00000129630 376 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 1700061H18Rik-202ENSMUST00000147221 564 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm15254-201ENSMUST00000149567 273 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm25412-201ENSMUST00000180258 107 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm23648-201ENSMUST00000180301 107 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm20619-205ENSMUST00000181633 581 ntTSL 2 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm28385-201ENSMUST00000185671 292 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 1700027A15Rik-201ENSMUST00000185768 321 ntTSL 5 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm37591-201ENSMUST00000193283 650 ntTSL 3 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm37062-201ENSMUST00000195028 701 ntTSL 5 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm5551-201ENSMUST00000199720 690 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Klrb1b-204ENSMUST00000205130 917 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm44132-201ENSMUST00000205142 151 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Klra13-ps-204ENSMUST00000205252 640 ntTSL 3 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 2310008N11Rik-204ENSMUST00000210955 457 ntTSL 5 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm9685-201ENSMUST00000211275 538 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 AC155241.1-201ENSMUST00000222709 415 ntTSL 5 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 AC164315.1-201ENSMUST00000226452 708 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Cd160-201ENSMUST00000047702 1121 ntAPPRIS P3 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Olfr853-201ENSMUST00000058296 918 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Olfr781-201ENSMUST00000075613 936 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Olfr972-201ENSMUST00000079767 945 ntAPPRIS P1 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Klk1b9-201ENSMUST00000081399 870 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm23506-201ENSMUST00000083077 107 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm17165-201ENSMUST00000096155 493 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Clca4c-ps-201ENSMUST00000098551 712 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Olfr1048-201ENSMUST00000099900 963 ntAPPRIS P2 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Tdo2-204ENSMUST00000193879 1616 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Mctp1-201ENSMUST00000109583 2283 ntAPPRIS P2 TSL 5 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Nedd4-207ENSMUST00000184333 4034 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm10319-201ENSMUST00000078431 1355 ntTSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 AC151530.1-203ENSMUST00000223343 2591 ntTSL 5 BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gm20300-201ENSMUST00000214634 3440 ntBASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC5.54□□□□□ -1.52
Nkx6-1Q99MA9 AC162936.1-201ENSMUST00000223676 2368 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 AC163354.1-204ENSMUST00000222226 2033 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Olfr1466-202ENSMUST00000207124 1981 ntAPPRIS P1 TSL 3 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Tcp1-ps1-201ENSMUST00000120941 1466 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 AC154184.1-201ENSMUST00000224375 1620 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Akap11-202ENSMUST00000123853 9364 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Tcrg-C1-201ENSMUST00000103558 924 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm22273-201ENSMUST00000104040 132 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm10936-201ENSMUST00000105264 252 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm13770-201ENSMUST00000117149 305 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm11972-201ENSMUST00000118514 389 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm14867-201ENSMUST00000120156 866 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm12074-201ENSMUST00000120189 219 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm14876-201ENSMUST00000120795 327 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm16362-201ENSMUST00000135189 214 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm14330-201ENSMUST00000155455 455 ntTSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm25970-201ENSMUST00000157165 86 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm23024-201ENSMUST00000158770 292 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Mrgpra9-202ENSMUST00000179005 1090 ntAPPRIS P2 TSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm26936-201ENSMUST00000182424 382 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 1700120K04Rik-201ENSMUST00000191038 546 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm37774-201ENSMUST00000194401 245 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm43237-201ENSMUST00000196835 1044 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Csn2-209ENSMUST00000199624 890 ntAPPRIS P3 TSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm33248-202ENSMUST00000206954 486 ntTSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm7128-201ENSMUST00000211639 533 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Olfr1086-202ENSMUST00000213198 1153 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Olfr897-ps1-201ENSMUST00000213589 935 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm18863-201ENSMUST00000217004 1299 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 AC153840.1-201ENSMUST00000219685 313 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm7550-201ENSMUST00000223334 282 ntTSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 AC154600.1-201ENSMUST00000226480 714 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Vmn1r13-201ENSMUST00000078885 903 ntAPPRIS P1 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Olfr1193-201ENSMUST00000081697 957 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm10800-201ENSMUST00000099683 660 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Atp13a5-203ENSMUST00000143373 3789 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Olfr1247-202ENSMUST00000111532 6070 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Arpp21-231ENSMUST00000178410 3419 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Prom1-208ENSMUST00000179059 3579 ntAPPRIS ALT2 TSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Baz2b-202ENSMUST00000112550 7895 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Vmn2r103-201ENSMUST00000172203 2571 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Gm37789-201ENSMUST00000192862 2889 ntBASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Olfr684-204ENSMUST00000217136 3182 ntAPPRIS P1 TSL 5 BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Ano5-202ENSMUST00000207044 3311 ntTSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Scd4-201ENSMUST00000058856 3306 ntAPPRIS P1 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 Pum2-203ENSMUST00000111123 4984 ntAPPRIS ALT2 TSL 1 (best) BASIC5.53□□□□□ -1.52
Nkx6-1Q99MA9 5530601H04Rik-207ENSMUST00000138460 3732 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Nkx6-1Q99MA9 Prrc2c-201ENSMUST00000028016 8815 ntAPPRIS ALT2 TSL 5 BASIC5.52□□□□□ -1.53
Nkx6-1Q99MA9 Vmn1r52-208ENSMUST00000228665 3226 ntAPPRIS P1 BASIC5.52□□□□□ -1.53
Nkx6-1Q99MA9 Slc26a3-201ENSMUST00000001254 2908 ntAPPRIS P1 TSL 1 (best) BASIC5.52□□□□□ -1.53
Nkx6-1Q99MA9 Gm20655-202ENSMUST00000181428 2946 ntTSL 1 (best) BASIC5.52□□□□□ -1.53
Retrieved 100 of 76,532 protein–RNA pairs in 84.9 ms