Protein–RNA interactions for Protein: Q99LI9

Clp1, Polyribonucleotide 5'-hydroxyl-kinase Clp1, mousemouse

Predictions only

Length 425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clp1Q99LI9 Gm37958-201ENSMUST00000193131 430 ntTSL 3 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Ighv1-45-201ENSMUST00000193677 352 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm37523-201ENSMUST00000194901 412 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Igkv11-114-201ENSMUST00000200013 346 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm7825-201ENSMUST00000204046 416 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm44068-201ENSMUST00000204049 2128 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm44149-201ENSMUST00000204256 226 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm44817-201ENSMUST00000205416 453 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 AC137127.3-201ENSMUST00000213340 349 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 AC093926.1-201ENSMUST00000213730 243 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm35274-201ENSMUST00000217709 646 ntTSL 5 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 AC153840.1-201ENSMUST00000219685 313 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 CT033781.1-201ENSMUST00000223128 454 ntTSL 5 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Vmn1r26-201ENSMUST00000049694 1020 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Olfr1136-201ENSMUST00000077471 1067 ntAPPRIS P1 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm23503-201ENSMUST00000083903 107 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Capn13-201ENSMUST00000095208 2614 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 AC121844.3-201ENSMUST00000219124 1785 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 Spire1-202ENSMUST00000082243 4950 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Xrn1-201ENSMUST00000034981 5499 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 A2m-201ENSMUST00000032203 4605 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Zfp78-201ENSMUST00000086323 1443 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gabrg1-201ENSMUST00000031119 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm3286-203ENSMUST00000201629 1945 ntAPPRIS P3 TSL 3 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Sp110-201ENSMUST00000093508 1921 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Car5b-201ENSMUST00000033739 3436 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Vmn2r17-201ENSMUST00000171841 2550 ntAPPRIS P1 TSL 5 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Ube4a-201ENSMUST00000117506 6039 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
Clp1Q99LI9 AC152946.1-201ENSMUST00000218446 3474 ntTSL 5 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 Gm37254-201ENSMUST00000193542 3901 ntBASIC6.3□□□□□ -1.4
Clp1Q99LI9 4930550L24Rik-202ENSMUST00000118305 1684 ntAPPRIS P1 TSL 3 BASIC6.3□□□□□ -1.4
Clp1Q99LI9 C230038L03Rik-201ENSMUST00000129409 2632 ntTSL 2 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Dclre1c-201ENSMUST00000061852 7075 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Olfr716-204ENSMUST00000213367 3585 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Olfr19-202ENSMUST00000206365 1967 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Pcdh11x-203ENSMUST00000113364 4454 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Vmn2r-ps133-201ENSMUST00000176979 2569 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Vmn1r22-203ENSMUST00000228076 3011 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Creb5-212ENSMUST00000205120 7482 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Meg3-209ENSMUST00000146701 14548 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Clp1Q99LI9 AC123705.3-201ENSMUST00000223531 2069 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Atp10b-201ENSMUST00000077659 6825 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 A730020M07Rik-202ENSMUST00000196621 2370 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Vmn1r52-204ENSMUST00000227578 2370 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Adgrl3-203ENSMUST00000117253 4764 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm25088-201ENSMUST00000101803 79 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm24265-201ENSMUST00000101833 141 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Mir678-201ENSMUST00000102114 84 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Acaca-202ENSMUST00000103201 9513 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Snord70-201ENSMUST00000104157 87 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm25564-201ENSMUST00000104604 132 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm15660-201ENSMUST00000118997 478 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm14267-201ENSMUST00000119751 496 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm23867-201ENSMUST00000122649 274 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Lgals8-208ENSMUST00000144283 1148 ntTSL 5 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Vamp4-207ENSMUST00000155003 1428 ntAPPRIS P1 TSL 3 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm9006-201ENSMUST00000165520 841 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm22851-201ENSMUST00000178741 94 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm25074-201ENSMUST00000178782 94 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Olfr1391-201ENSMUST00000187509 938 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Olfr416-ps1-201ENSMUST00000192734 804 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm36954-201ENSMUST00000195362 363 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm19649-201ENSMUST00000201126 822 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Olfr638-201ENSMUST00000209757 966 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm45556-201ENSMUST00000210689 345 ntTSL 5 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm45727-201ENSMUST00000212886 572 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 AC162387.1-201ENSMUST00000213369 213 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Olfr479-203ENSMUST00000214599 3248 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Olfr962-ps1-201ENSMUST00000217332 442 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 AC155255.1-201ENSMUST00000218751 1428 ntTSL 5 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 AC167192.2-201ENSMUST00000224794 198 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 AC122448.1-201ENSMUST00000226317 772 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Vmn1r54-201ENSMUST00000058039 948 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm23460-201ENSMUST00000083258 109 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm23093-201ENSMUST00000083450 102 ntBASIC6.29□□□□□ -1.4
Clp1Q99LI9 Cfap70-201ENSMUST00000022348 3469 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clp1Q99LI9 AL606496.1-201ENSMUST00000220673 4472 ntTSL 5 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm14391-203ENSMUST00000109056 1956 ntTSL 3 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Zfp78-204ENSMUST00000207347 3883 ntAPPRIS P4 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Trim16-203ENSMUST00000108703 3574 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Gm10767-201ENSMUST00000099412 1652 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Vmn1r27-203ENSMUST00000228530 3115 ntAPPRIS P2 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Sh2d1b1-201ENSMUST00000179976 2544 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Zfp27-202ENSMUST00000159920 3381 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Sytl5-202ENSMUST00000086165 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Serpina3b-201ENSMUST00000085052 2070 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
Clp1Q99LI9 Olfr560-201ENSMUST00000210453 2168 ntAPPRIS P1 TSL 5 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gcnt2-203ENSMUST00000110191 4352 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Robo2-210ENSMUST00000226478 8059 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 AC122357.3-201ENSMUST00000221260 2293 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Ktn1-214ENSMUST00000188553 3918 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Pramef6-202ENSMUST00000105767 1967 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Olfr1171-ps1-201ENSMUST00000118079 837 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm17216-201ENSMUST00000130872 728 ntTSL 5 BASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm24175-201ENSMUST00000158931 129 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm17121-201ENSMUST00000170414 847 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm17222-201ENSMUST00000180135 847 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm28066-201ENSMUST00000188657 472 ntBASIC6.28□□□□□ -1.4
Clp1Q99LI9 Gm9332-201ENSMUST00000198431 730 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 76,532 protein–RNA pairs in 82.6 ms