Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Gm10778-201ENSMUST00000105315 1497 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim9Q8C7M3 Gm4767-201ENSMUST00000099439 1497 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim9Q8C7M3 Adgb-205ENSMUST00000179956 5218 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Trim9Q8C7M3 AC121844.3-201ENSMUST00000219124 1785 ntBASIC5.36□□□□□ -1.55
Trim9Q8C7M3 Iqcm-202ENSMUST00000121983 1894 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim9Q8C7M3 Fap-201ENSMUST00000000402 2187 ntAPPRIS ALT2 TSL 5 BASIC5.36□□□□□ -1.55
Trim9Q8C7M3 Gabra6-201ENSMUST00000020703 2436 ntAPPRIS P3 TSL 1 (best) BASIC5.36□□□□□ -1.55
Trim9Q8C7M3 Vmn1r32-202ENSMUST00000227014 2661 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Trim9Q8C7M3 Gm28178-201ENSMUST00000188544 2943 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
Trim9Q8C7M3 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC5.36□□□□□ -1.55
Trim9Q8C7M3 Abcb5-201ENSMUST00000035515 3876 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Zfp874b-201ENSMUST00000019572 3744 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Fignl1-202ENSMUST00000109664 2807 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Vmn1r-ps73-201ENSMUST00000173130 2120 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Olfr1163-202ENSMUST00000215268 1611 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Aadacl2-201ENSMUST00000169794 1590 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Skint9-201ENSMUST00000058605 1372 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Trav14d-3-dv8-201ENSMUST00000103608 456 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Vmn1r2-201ENSMUST00000105160 921 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Hbb-bh2-201ENSMUST00000106866 558 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm13250-201ENSMUST00000117209 753 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Olfr1073-ps1-201ENSMUST00000117635 381 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm14520-201ENSMUST00000119258 387 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm14619-201ENSMUST00000120480 168 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm13147-201ENSMUST00000125785 585 ntTSL 2 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 4933416E14Rik-201ENSMUST00000130841 491 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm16345-201ENSMUST00000146065 158 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm22361-201ENSMUST00000158435 176 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 4930558K02Rik-202ENSMUST00000162676 983 ntAPPRIS P1 TSL 3 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm8267-202ENSMUST00000169062 1240 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Faiml-201ENSMUST00000178051 785 ntAPPRIS P1 TSL 5 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 1500004A13Rik-206ENSMUST00000184170 576 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm18698-201ENSMUST00000192327 668 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 BC037156-201ENSMUST00000196993 430 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm43345-201ENSMUST00000199484 269 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm44135-201ENSMUST00000205221 368 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 B130024G19Rik-205ENSMUST00000207952 485 ntTSL 3 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 AC116726.2-201ENSMUST00000217629 986 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 AC121844.1-201ENSMUST00000218706 137 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 AC154552.2-201ENSMUST00000223117 794 ntTSL 5 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 CT025603.4-201ENSMUST00000225777 413 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 AC125539.2-202ENSMUST00000227983 587 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 AC125539.2-201ENSMUST00000228339 753 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Vmn1r79-201ENSMUST00000062811 921 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm25586-201ENSMUST00000082499 112 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm24150-201ENSMUST00000082759 104 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Mir134-201ENSMUST00000083492 71 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm23104-201ENSMUST00000083722 104 ntBASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Olfr1290-201ENSMUST00000099616 939 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 4930533I22Rik-201ENSMUST00000176290 2564 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Gm30524-201ENSMUST00000204271 2300 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Rbm41-203ENSMUST00000113007 3691 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 P2ry12-202ENSMUST00000170388 2101 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 1700061I17Rik-201ENSMUST00000029642 1962 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
Trim9Q8C7M3 Cdh10-202ENSMUST00000166873 3176 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm37749-201ENSMUST00000193917 1899 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm3675-201ENSMUST00000175904 1653 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm43613-201ENSMUST00000199409 1613 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Olfr187-202ENSMUST00000207673 1322 ntAPPRIS P1 TSL 2 BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Trbv19-201ENSMUST00000103276 566 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Mup6-203ENSMUST00000107521 642 ntTSL 3 BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm14751-201ENSMUST00000117693 222 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm13491-201ENSMUST00000118267 235 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm3267-201ENSMUST00000118671 473 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm16179-201ENSMUST00000120685 373 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Bloc1s1-202ENSMUST00000131271 475 ntTSL 5 BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm13194-201ENSMUST00000142299 311 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm14257-201ENSMUST00000144649 765 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm14011-201ENSMUST00000145178 302 ntTSL 2 BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Mir5128-201ENSMUST00000175217 84 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm38279-201ENSMUST00000194067 1131 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 AC136146.1-201ENSMUST00000196180 91 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Obox4-ps5-201ENSMUST00000196368 397 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Igkv13-73-1-201ENSMUST00000196767 200 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm43724-201ENSMUST00000197516 226 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm42457-201ENSMUST00000197572 367 ntTSL 2 BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm42814-201ENSMUST00000199370 460 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Obox4-ps10-201ENSMUST00000199376 504 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm44485-201ENSMUST00000199569 137 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm18325-201ENSMUST00000203228 835 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Snhg1-205ENSMUST00000205825 495 ntTSL 3 BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Olfr187-201ENSMUST00000206428 978 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 C030038I04Rik-201ENSMUST00000207840 740 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm45658-201ENSMUST00000209197 580 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gm19196-201ENSMUST00000209258 357 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 C230072F16Rik-203ENSMUST00000220322 1136 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 AC131745.2-201ENSMUST00000225736 565 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 AC110380.1-201ENSMUST00000226987 389 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 AC121960.3-201ENSMUST00000227077 623 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 AC144628.1-201ENSMUST00000227943 466 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Olfr670-201ENSMUST00000050482 939 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Olfr724-201ENSMUST00000075030 1006 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Sult2a6-201ENSMUST00000076576 961 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Gmfg-201ENSMUST00000078845 637 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Mir31-201ENSMUST00000083474 106 ntBASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Olfr1278-201ENSMUST00000090330 942 ntAPPRIS P1 BASIC5.34□□□□□ -1.55
Trim9Q8C7M3 Clec2e-201ENSMUST00000032258 2099 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
Retrieved 100 of 76,532 protein–RNA pairs in 80 ms