Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Gm44723-201ENSMUST00000207369 4000 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Zgrf1-201ENSMUST00000043108 7046 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Zfp605-201ENSMUST00000086686 2085 ntAPPRIS P1 TSL 3 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 B3gnt5-201ENSMUST00000079780 4258 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Mir449c-201ENSMUST00000102192 109 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Ighv1-64-201ENSMUST00000103535 405 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Defb45-201ENSMUST00000109834 385 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm11146-201ENSMUST00000114231 96 ntAPPRIS P1 TSL 5 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm13641-201ENSMUST00000117993 473 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Olfr363-ps-201ENSMUST00000119049 254 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm13452-201ENSMUST00000120896 1097 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm11925-201ENSMUST00000121375 535 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm11861-201ENSMUST00000141571 382 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm7437-201ENSMUST00000156744 661 ntTSL 2 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm3470-201ENSMUST00000160819 420 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Vmn2r-ps67-201ENSMUST00000172624 385 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm22584-201ENSMUST00000177935 92 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm8247-202ENSMUST00000178759 375 ntAPPRIS ALT2 TSL 5 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm7952-201ENSMUST00000180540 984 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm5430-201ENSMUST00000182525 915 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Mir7685-201ENSMUST00000183555 62 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm27255-201ENSMUST00000184303 529 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm28179-202ENSMUST00000189029 327 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm28532-201ENSMUST00000190408 572 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 1700031M16Rik-206ENSMUST00000191037 711 ntAPPRIS P5 TSL 3 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm43415-201ENSMUST00000201934 750 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm6850-201ENSMUST00000210031 530 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 AC118476.1-201ENSMUST00000216237 349 ntTSL 3 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 AC153506.2-201ENSMUST00000218051 257 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 AC170086.1-201ENSMUST00000225190 497 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm8412-201ENSMUST00000077493 440 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm34549-201ENSMUST00000207057 1611 ntTSL 5 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 CT009480.2-201ENSMUST00000225152 3369 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Wdr12-201ENSMUST00000027173 10012 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm16503-201ENSMUST00000104964 3283 ntAPPRIS P1 BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Homez-201ENSMUST00000081162 5609 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Slc28a3-201ENSMUST00000022036 4567 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Lrrc49-201ENSMUST00000053171 3086 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Taf7-201ENSMUST00000066272 3302 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 A330008L17Rik-202ENSMUST00000153366 2614 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Gm732-201ENSMUST00000101290 1661 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Fam205c-201ENSMUST00000055944 1655 ntAPPRIS P2 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 AC125328.1-201ENSMUST00000226812 2265 ntBASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Zfp760-201ENSMUST00000073312 4209 ntAPPRIS P1 TSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 Magi2-207ENSMUST00000197553 3264 ntTSL 1 (best) BASIC6.74□□□□□ -1.33
Trim47Q8C0E3 AC154576.1-202ENSMUST00000223966 3320 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm37897-201ENSMUST00000192613 3561 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm30948-201ENSMUST00000195683 4827 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Noct-202ENSMUST00000144826 9797 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm26648-201ENSMUST00000181925 5831 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Virma-203ENSMUST00000108307 6571 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Spam1-202ENSMUST00000202331 2100 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm10693-202ENSMUST00000205904 4007 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm44043-201ENSMUST00000203426 3253 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm3183-202ENSMUST00000201703 2048 ntAPPRIS P5 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Tenm4-203ENSMUST00000107166 13172 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 AF366264-201ENSMUST00000071308 3157 ntAPPRIS P1 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Zzz3-204ENSMUST00000106103 2674 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Mmp13-201ENSMUST00000015394 2673 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm24935-201ENSMUST00000103770 110 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm22372-201ENSMUST00000104589 136 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Skint8-201ENSMUST00000106572 1290 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Prl3c1-202ENSMUST00000110364 850 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm12230-201ENSMUST00000118301 454 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm12235-201ENSMUST00000118596 170 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm14292-201ENSMUST00000118761 456 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm13082-201ENSMUST00000118877 561 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm14128-201ENSMUST00000119514 1011 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Eif1-ps3-201ENSMUST00000121450 342 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm23258-201ENSMUST00000158319 106 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm7925-201ENSMUST00000166690 401 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Galnt5-203ENSMUST00000166729 3812 ntAPPRIS P1 TSL 2 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm13698-201ENSMUST00000178325 732 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm13694-202ENSMUST00000178655 732 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Prp2-202ENSMUST00000178961 951 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm13696-201ENSMUST00000179311 732 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm13693-202ENSMUST00000179448 732 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm13695-202ENSMUST00000179504 732 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm13697-202ENSMUST00000179552 732 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm28146-201ENSMUST00000185517 701 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm28574-201ENSMUST00000185757 699 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm28397-201ENSMUST00000187970 699 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Nabp1-207ENSMUST00000188204 972 ntTSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm29289-201ENSMUST00000188358 576 ntAPPRIS P1 TSL 5 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm29366-201ENSMUST00000190481 699 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Ighv1-27-201ENSMUST00000194473 340 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm36939-201ENSMUST00000194889 439 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm42758-201ENSMUST00000202146 283 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm44768-201ENSMUST00000205719 393 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm44813-201ENSMUST00000207921 361 ntTSL 3 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm45850-201ENSMUST00000212536 338 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm33981-201ENSMUST00000219918 660 ntTSL 5 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 CT030170.4-202ENSMUST00000221109 540 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm18618-201ENSMUST00000222211 473 ntBASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Gm36423-204ENSMUST00000222446 541 ntTSL 2 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Tnik-206ENSMUST00000160518 3996 ntAPPRIS ALT2 TSL 5 BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Trp53bp1-201ENSMUST00000110647 9405 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Mfap1a-201ENSMUST00000089926 4198 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Themis-203ENSMUST00000105516 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.73□□□□□ -1.33
Trim47Q8C0E3 Clec12a-201ENSMUST00000065289 2502 ntAPPRIS P1 TSL 1 (best) BASIC6.73□□□□□ -1.33
Retrieved 100 of 76,532 protein–RNA pairs in 87.4 ms