Protein–RNA interactions for Protein: Q80VI1

Trim56, E3 ubiquitin-protein ligase TRIM56, mousemouse

Known RBP Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56Q80VI1 Gm17991-201ENSMUST00000208139 297 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm36368-201ENSMUST00000212026 461 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm36543-201ENSMUST00000217933 542 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm7530-201ENSMUST00000218466 605 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Vmn2r-ps99-201ENSMUST00000221276 1203 ntTSL 5 BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Gm46994-201ENSMUST00000221523 219 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 AC160980.2-201ENSMUST00000225131 949 ntBASIC6.43□□□□□ -1.38
Trim56Q80VI1 Glod5-201ENSMUST00000033503 673 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Olfr168-201ENSMUST00000078554 939 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Olfr313-201ENSMUST00000082220 1074 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
Trim56Q80VI1 E330014E10Rik-201ENSMUST00000071182 2476 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Usp25-201ENSMUST00000023580 4412 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
Trim56Q80VI1 Olfr31-202ENSMUST00000206009 4017 ntAPPRIS P1 TSL 2 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Samd12-201ENSMUST00000078673 9019 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm42819-201ENSMUST00000199630 5121 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Senp8-202ENSMUST00000163586 3570 ntAPPRIS P3 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Ube2n-201ENSMUST00000099329 3867 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Cd200r3-208ENSMUST00000164007 1484 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm45352-201ENSMUST00000210140 1452 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Slc22a29-205ENSMUST00000222533 1473 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm42727-201ENSMUST00000202446 2823 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Olfr99-202ENSMUST00000216328 1778 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Sis-202ENSMUST00000167334 5953 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm20287-201ENSMUST00000172848 2367 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm23750-201ENSMUST00000104222 132 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Lipe-203ENSMUST00000105177 1251 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm6134-201ENSMUST00000117265 171 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm12294-201ENSMUST00000119723 490 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm25176-201ENSMUST00000122640 125 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm15533-201ENSMUST00000126205 465 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm26468-201ENSMUST00000158644 106 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm17919-201ENSMUST00000173344 312 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm20519-201ENSMUST00000173684 359 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Znrd1as-203ENSMUST00000173814 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Vmn1r-ps11-201ENSMUST00000176097 853 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm21809-201ENSMUST00000178495 468 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm17467-201ENSMUST00000178553 468 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm17412-201ENSMUST00000179261 468 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm17577-201ENSMUST00000179916 468 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm27313-201ENSMUST00000183500 142 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 1700057G04Rik-206ENSMUST00000185580 842 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm28429-201ENSMUST00000188521 363 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm20811-201ENSMUST00000190500 553 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Il6-202ENSMUST00000195978 651 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm5034-201ENSMUST00000199115 634 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm44465-201ENSMUST00000199536 114 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm3279-201ENSMUST00000203099 1092 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm5581-202ENSMUST00000204992 714 ntTSL 3 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm45686-202ENSMUST00000211580 1138 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm45721-201ENSMUST00000212267 607 ntTSL 3 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Spata19-202ENSMUST00000214158 627 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm32526-201ENSMUST00000221878 981 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 AC174797.3-202ENSMUST00000224578 587 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Defa26-201ENSMUST00000074343 372 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm17017-201ENSMUST00000161540 2405 ntTSL 5 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Olfr1302-202ENSMUST00000214708 2461 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Herc1-201ENSMUST00000042824 15153 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Zfp27-205ENSMUST00000162592 3845 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm37087-201ENSMUST00000192966 3309 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Gm37752-201ENSMUST00000193494 3309 ntBASIC6.42□□□□□ -1.38
Trim56Q80VI1 Olfr1270-203ENSMUST00000215578 4982 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 AC132852.2-201ENSMUST00000216052 2794 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Prr14l-201ENSMUST00000120129 9959 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Olfr1385-202ENSMUST00000214948 4412 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Ubr4-201ENSMUST00000097822 15928 ntAPPRIS P1 TSL 5 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Abcc9-204ENSMUST00000111771 7499 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm20707-201ENSMUST00000176201 2516 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Lrp1b-209ENSMUST00000185258 1874 ntTSL 5 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Klf7-202ENSMUST00000114086 7662 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Btbd35f24-201ENSMUST00000178080 1941 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Siae-201ENSMUST00000002007 3339 ntAPPRIS ALT2 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 C4bp-201ENSMUST00000027657 3045 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Stk3-205ENSMUST00000226555 2730 ntAPPRIS ALT2 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Traj40-201ENSMUST00000103702 61 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm14197-201ENSMUST00000117480 1049 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm13451-201ENSMUST00000117649 592 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm13537-201ENSMUST00000120467 267 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm11369-201ENSMUST00000120812 318 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Llph-ps2-201ENSMUST00000122000 393 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm7609-204ENSMUST00000161424 461 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Trbv10-201ENSMUST00000168322 289 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm17044-201ENSMUST00000168549 828 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm17333-201ENSMUST00000169531 378 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm20619-202ENSMUST00000176283 1085 ntTSL 1 (best) BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm25944-201ENSMUST00000178758 94 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm2914-201ENSMUST00000186120 328 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm29634-201ENSMUST00000188467 696 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm28699-201ENSMUST00000189193 696 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm8403-201ENSMUST00000189712 1298 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm15754-202ENSMUST00000202846 758 ntTSL 3 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm45366-201ENSMUST00000209828 384 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Gm45690-201ENSMUST00000210775 246 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 AC116460.1-201ENSMUST00000219040 313 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 AC160999.1-201ENSMUST00000225675 810 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 AC167013.2-202ENSMUST00000227035 333 ntBASIC6.41□□□□□ -1.38
Trim56Q80VI1 Capza3-201ENSMUST00000043797 1222 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Trim56Q80VI1 Olfr924-201ENSMUST00000072977 927 ntAPPRIS P1 BASIC6.41□□□□□ -1.38
Retrieved 100 of 76,532 protein–RNA pairs in 73.1 ms