Protein–RNA interactions for Protein: Q07563

Col17a1, Collagen alpha-1(XVII) chain, mousemouse

Predictions only

Length 1,470 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col17a1Q07563 Gm17061-201ENSMUST00000163167 499 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm44501-201ENSMUST00000167713 1229 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm23638-201ENSMUST00000175073 126 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm23158-201ENSMUST00000175076 126 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm22907-201ENSMUST00000175198 126 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm22625-201ENSMUST00000175382 126 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm22875-201ENSMUST00000175449 126 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm27857-201ENSMUST00000176930 126 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm26268-201ENSMUST00000177685 126 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm23681-201ENSMUST00000178821 126 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm27818-201ENSMUST00000184536 159 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm18426-201ENSMUST00000191874 973 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm37343-201ENSMUST00000192542 111 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm37830-201ENSMUST00000195282 837 ntTSL 5 BASIC7.25□□□□□ -1.25
Col17a1Q07563 Ube2l3-ps1-201ENSMUST00000199777 436 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 AC113291.1-201ENSMUST00000217557 403 ntTSL 3 BASIC7.25□□□□□ -1.25
Col17a1Q07563 AC163354.1-203ENSMUST00000222356 643 ntTSL 5 BASIC7.25□□□□□ -1.25
Col17a1Q07563 AC160756.1-201ENSMUST00000227266 235 ntBASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm16892-201ENSMUST00000180999 1726 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col17a1Q07563 Cacnb4-203ENSMUST00000102761 8039 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col17a1Q07563 Pja2-201ENSMUST00000024888 4531 ntAPPRIS P4 TSL 5 BASIC7.25□□□□□ -1.25
Col17a1Q07563 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC7.25□□□□□ -1.25
Col17a1Q07563 Obox3-202ENSMUST00000095217 1603 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col17a1Q07563 Zranb3-201ENSMUST00000086614 4210 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col17a1Q07563 Olfr1353-201ENSMUST00000039718 1992 ntAPPRIS P1 TSL 2 BASIC7.25□□□□□ -1.25
Col17a1Q07563 Ankrd34c-201ENSMUST00000060700 5457 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col17a1Q07563 Skil-201ENSMUST00000029194 6717 ntAPPRIS P3 TSL 5 BASIC7.25□□□□□ -1.25
Col17a1Q07563 Cyp3a13-201ENSMUST00000031741 2956 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col17a1Q07563 Gbp7-201ENSMUST00000045097 5614 ntAPPRIS P1 TSL 1 (best) BASIC7.25□□□□□ -1.25
Col17a1Q07563 Olfr736-202ENSMUST00000213402 2402 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm37099-201ENSMUST00000191902 3451 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm22750-201ENSMUST00000102076 103 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Prl2c2-201ENSMUST00000110594 842 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm13550-201ENSMUST00000118185 525 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm13132-201ENSMUST00000121194 472 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm22453-201ENSMUST00000122801 318 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm12910-201ENSMUST00000135902 724 ntTSL 5 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm25667-201ENSMUST00000157701 275 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Vmn1r238-201ENSMUST00000165255 921 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm10292-201ENSMUST00000183142 581 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm7135-201ENSMUST00000187538 675 ntTSL 3 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm42857-201ENSMUST00000200823 339 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 AL772397.1-201ENSMUST00000216707 606 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 AC134528.1-201ENSMUST00000219156 387 ntTSL 2 BASIC7.24□□□□□ -1.25
Col17a1Q07563 AC147639.1-201ENSMUST00000224216 661 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 AC159242.1-201ENSMUST00000225832 194 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Olfr186-201ENSMUST00000062380 1005 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm6065-201ENSMUST00000081336 492 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm25140-201ENSMUST00000083254 140 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 n-R5s168-201ENSMUST00000083948 104 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm42510-201ENSMUST00000196470 2258 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Ikzf2-201ENSMUST00000027146 9278 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col17a1Q07563 Ddx3y-201ENSMUST00000091190 4600 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm5583-201ENSMUST00000174328 1519 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Ccar1-211ENSMUST00000219527 3862 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm3239-201ENSMUST00000163525 1751 ntAPPRIS P5 TSL 5 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm3629-201ENSMUST00000171706 1756 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Clca4b-201ENSMUST00000098549 2997 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col17a1Q07563 Olfr734-203ENSMUST00000217152 4416 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Usp46-202ENSMUST00000119154 4738 ntTSL 5 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm4922-201ENSMUST00000055107 1950 ntAPPRIS P1 TSL 3 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm37248-201ENSMUST00000193576 3174 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Olfr616-202ENSMUST00000214806 1641 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Olfr616-203ENSMUST00000217293 1627 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm7869-201ENSMUST00000121457 1322 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Zfp799-205ENSMUST00000202988 6012 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col17a1Q07563 Prox1-202ENSMUST00000175916 7913 ntAPPRIS P1 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col17a1Q07563 Klrd1-203ENSMUST00000119520 919 ntAPPRIS ALT2 TSL 5 BASIC7.24□□□□□ -1.25
Col17a1Q07563 AI847159-202ENSMUST00000138431 952 ntTSL 2 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm23112-201ENSMUST00000158606 125 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Obox1-205ENSMUST00000173443 835 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Obox2-204ENSMUST00000174305 834 ntAPPRIS P1 TSL 5 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Obox4-ps29-201ENSMUST00000175956 1134 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm20776-201ENSMUST00000189940 700 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Obox4-ps24-201ENSMUST00000197686 540 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm30409-201ENSMUST00000223302 229 ntTSL 3 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Olfr513-201ENSMUST00000055146 930 ntAPPRIS P1 BASIC7.24□□□□□ -1.25
Col17a1Q07563 Skint2-201ENSMUST00000058791 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm25586-201ENSMUST00000082499 112 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Gm24919-201ENSMUST00000083020 106 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Mir350-201ENSMUST00000083639 99 ntBASIC7.24□□□□□ -1.25
Col17a1Q07563 Nfatc3-206ENSMUST00000212742 3207 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col17a1Q07563 Lrrc4c-202ENSMUST00000135431 3646 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm14445-201ENSMUST00000117051 1484 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Rfc1-203ENSMUST00000203581 4689 ntAPPRIS ALT2 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col17a1Q07563 St18-208ENSMUST00000140079 5892 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col17a1Q07563 Speer5-ps1-203ENSMUST00000217649 7431 ntTSL 5 BASIC7.23□□□□□ -1.25
Col17a1Q07563 Cd200r3-203ENSMUST00000114611 1407 ntAPPRIS P4 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col17a1Q07563 Slmap-201ENSMUST00000038522 4501 ntAPPRIS P3 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm7648-201ENSMUST00000173036 1658 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Rc3h1-201ENSMUST00000035911 3476 ntAPPRIS ALT2 TSL 5 BASIC7.23□□□□□ -1.25
Col17a1Q07563 Olfr303-204ENSMUST00000215733 3914 ntAPPRIS P1 TSL 5 BASIC7.23□□□□□ -1.25
Col17a1Q07563 Cep112it-201ENSMUST00000143781 4813 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm2366-201ENSMUST00000180753 3982 ntTSL 1 (best) BASIC7.23□□□□□ -1.25
Col17a1Q07563 Slc22a28-201ENSMUST00000065651 2004 ntAPPRIS P1 TSL 1 (best) BASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm2888-201ENSMUST00000170521 1758 ntAPPRIS P5 TSL 5 BASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm25848-201ENSMUST00000116790 144 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm14973-201ENSMUST00000117248 255 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Vmn1r-ps109-201ENSMUST00000119308 725 ntBASIC7.23□□□□□ -1.25
Col17a1Q07563 Gm9435-201ENSMUST00000120379 877 ntBASIC7.23□□□□□ -1.25
Retrieved 100 of 76,532 protein–RNA pairs in 95 ms