Protein–RNA interactions for Protein: Q04857

Col6a1, Collagen alpha-1(VI) chain, mousemouse

Predictions only

Length 1,025 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a1Q04857 Gm29531-201ENSMUST00000190569 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21914-202ENSMUST00000190577 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm20978-201ENSMUST00000190688 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm20963-201ENSMUST00000190880 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29316-201ENSMUST00000190953 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29351-201ENSMUST00000191052 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29466-201ENSMUST00000191077 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm20987-201ENSMUST00000191165 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28194-202ENSMUST00000191217 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm28461-202ENSMUST00000191406 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm29389-201ENSMUST00000191562 352 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm37927-201ENSMUST00000192238 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm37544-201ENSMUST00000192803 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm37635-201ENSMUST00000193129 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm21809-202ENSMUST00000194072 174 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm37838-201ENSMUST00000194464 312 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Smr2-203ENSMUST00000196477 676 ntAPPRIS ALT2 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 4930539C22Rik-201ENSMUST00000198231 970 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm42896-201ENSMUST00000201249 1113 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm30784-201ENSMUST00000204491 794 ntTSL 2 BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm45037-201ENSMUST00000207475 673 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a1Q04857 Olfr484-201ENSMUST00000210881 1098 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
Col6a1Q04857 AC158803.2-201ENSMUST00000219452 679 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 AC124420.1-201ENSMUST00000219779 791 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 CT025611.2-201ENSMUST00000220475 879 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm3565-201ENSMUST00000222670 609 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm23815-201ENSMUST00000083231 107 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Olfr586-201ENSMUST00000084811 954 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
Col6a1Q04857 Smr2-201ENSMUST00000087043 676 ntAPPRIS P3 TSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm23520-201ENSMUST00000093736 107 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Defa-ps18-201ENSMUST00000098889 371 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm45426-201ENSMUST00000209393 3672 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm42697-201ENSMUST00000198992 4092 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Sox6-204ENSMUST00000166877 8079 ntAPPRIS ALT2 TSL 5 BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm17435-201ENSMUST00000181452 2994 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm12784-202ENSMUST00000206001 3739 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm37248-201ENSMUST00000193576 3174 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 G530011O06Rik-201ENSMUST00000154810 2380 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm37630-201ENSMUST00000194210 1456 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Olfr1359-203ENSMUST00000214435 4425 ntAPPRIS P1 TSL 2 BASIC6.28□□□□□ -1.4
Col6a1Q04857 Olfr55-203ENSMUST00000214891 4428 ntTSL 5 BASIC6.28□□□□□ -1.4
Col6a1Q04857 Gm38372-201ENSMUST00000194854 4028 ntBASIC6.28□□□□□ -1.4
Col6a1Q04857 Ipo5-201ENSMUST00000032898 4518 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.4
Col6a1Q04857 Sytl2-202ENSMUST00000107210 3718 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a1Q04857 Agps-203ENSMUST00000175646 1839 ntAPPRIS ALT2 TSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm5346-201ENSMUST00000056023 2326 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Vmn2r124-201ENSMUST00000176802 2568 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm34004-201ENSMUST00000215460 2837 ntTSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 AC137871.4-201ENSMUST00000226323 3901 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Ppp1r42-201ENSMUST00000027049 1425 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a1Q04857 Nr3c1-204ENSMUST00000115571 6327 ntAPPRIS P2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a1Q04857 Bclaf1-203ENSMUST00000185800 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a1Q04857 AC154755.2-201ENSMUST00000224384 2857 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Ccl28-201ENSMUST00000099241 3740 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm15713-201ENSMUST00000155900 1546 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a1Q04857 Olfr1504-202ENSMUST00000209192 1514 ntAPPRIS P1 TSL 3 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm24430-201ENSMUST00000104077 104 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm15140-201ENSMUST00000112565 984 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Fam122c-201ENSMUST00000114835 745 ntAPPRIS P1 TSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a1Q04857 Zfp389-201ENSMUST00000118425 675 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm15428-201ENSMUST00000121352 333 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm11759-201ENSMUST00000121742 464 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm5924-201ENSMUST00000132554 871 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm10057-201ENSMUST00000144098 984 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm13794-201ENSMUST00000148637 468 ntTSL 3 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm26349-201ENSMUST00000157530 130 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm10319-202ENSMUST00000159439 846 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Naa60-211ENSMUST00000176625 876 ntTSL 2 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm5926-201ENSMUST00000177740 711 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm21915-201ENSMUST00000177787 402 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Spin2f-201ENSMUST00000177990 765 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 4921511M17Rik-201ENSMUST00000177994 984 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Samt1-201ENSMUST00000178342 984 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Samt1-202ENSMUST00000178698 834 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 4921511M17Rik-202ENSMUST00000179369 834 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Spin2e-201ENSMUST00000179716 705 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm26824-201ENSMUST00000180506 1164 ntTSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm26970-201ENSMUST00000182990 964 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Ms4a4a-201ENSMUST00000188995 836 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 1700047L14Rik-201ENSMUST00000189659 511 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm38224-201ENSMUST00000191648 2100 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm43470-201ENSMUST00000196175 454 ntTSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm44319-201ENSMUST00000196974 93 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Mir6375-201ENSMUST00000197176 95 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm43624-201ENSMUST00000197368 180 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm17775-201ENSMUST00000198542 258 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm8523-201ENSMUST00000211386 552 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Gm31698-202ENSMUST00000214385 527 ntTSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 AC108846.2-201ENSMUST00000214925 731 ntTSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 AC113204.1-202ENSMUST00000219846 578 ntTSL 3 BASIC6.27□□□□□ -1.41
Col6a1Q04857 AC149586.1-201ENSMUST00000222647 645 ntTSL 3 BASIC6.27□□□□□ -1.41
Col6a1Q04857 AC154510.1-201ENSMUST00000223925 737 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 AC129085.4-201ENSMUST00000224536 570 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 AC154436.2-201ENSMUST00000227408 208 ntBASIC6.27□□□□□ -1.41
Col6a1Q04857 Olfr1314-201ENSMUST00000099598 939 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Olfr1000-201ENSMUST00000099921 945 ntAPPRIS P1 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Mef2c-203ENSMUST00000185052 3556 ntTSL 1 (best) BASIC6.27□□□□□ -1.41
Col6a1Q04857 Olfr303-203ENSMUST00000215532 3572 ntAPPRIS P1 TSL 5 BASIC6.27□□□□□ -1.41
Col6a1Q04857 Olfr872-201ENSMUST00000086474 1897 ntAPPRIS P1 TSL 2 BASIC6.27□□□□□ -1.41
Col6a1Q04857 AC139754.3-201ENSMUST00000220444 1627 ntBASIC6.27□□□□□ -1.41
Retrieved 100 of 76,532 protein–RNA pairs in 115.4 ms