Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Rpl23a-ps14-201ENSMUST00000118777 424 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm11877-201ENSMUST00000118921 852 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm15274-201ENSMUST00000131442 291 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm14410-202ENSMUST00000133301 1113 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CiitaP79621 Gm21979-201ENSMUST00000139887 291 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Mllt3-207ENSMUST00000148059 422 ntTSL 5 BASIC5.04□□□□□ -1.6
CiitaP79621 Gm15259-201ENSMUST00000151262 291 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm15279-201ENSMUST00000155593 288 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm14637-201ENSMUST00000156516 444 ntTSL 2 BASIC5.04□□□□□ -1.6
CiitaP79621 Gm24507-201ENSMUST00000157683 134 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm26992-201ENSMUST00000182089 468 ntAPPRIS P1 TSL 2 BASIC5.04□□□□□ -1.6
CiitaP79621 Ly6c1-203ENSMUST00000185200 540 ntTSL 2 BASIC5.04□□□□□ -1.6
CiitaP79621 Gm9541-201ENSMUST00000188409 502 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm20954-201ENSMUST00000189078 644 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm18181-201ENSMUST00000190670 736 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm37857-201ENSMUST00000191784 1199 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm37401-201ENSMUST00000192053 347 ntTSL 5 BASIC5.04□□□□□ -1.6
CiitaP79621 Gm43828-201ENSMUST00000196890 639 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm8069-201ENSMUST00000197887 154 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm42663-201ENSMUST00000199883 351 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm42643-201ENSMUST00000200504 279 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm9560-201ENSMUST00000205012 1201 ntBASIC5.04□□□□□ -1.6
CiitaP79621 CT025625.1-201ENSMUST00000217786 460 ntTSL 5 BASIC5.04□□□□□ -1.6
CiitaP79621 AC102435.1-201ENSMUST00000222199 908 ntTSL 5 BASIC5.04□□□□□ -1.6
CiitaP79621 AC129935.1-201ENSMUST00000226302 873 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CiitaP79621 Olfr493-201ENSMUST00000080106 945 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CiitaP79621 Gm25799-201ENSMUST00000082643 107 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm25818-201ENSMUST00000083282 164 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Olfr1180-201ENSMUST00000099824 1063 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CiitaP79621 Vps13d-202ENSMUST00000036579 15849 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
CiitaP79621 Nxt2-202ENSMUST00000112913 2538 ntTSL 3 BASIC5.04□□□□□ -1.6
CiitaP79621 Vmn1r185-205ENSMUST00000227461 5318 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CiitaP79621 Olfr220-202ENSMUST00000194229 3286 ntAPPRIS P1 TSL 3 BASIC5.04□□□□□ -1.6
CiitaP79621 Vmn2r31-201ENSMUST00000075108 3660 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CiitaP79621 Igip-201ENSMUST00000210490 1417 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
CiitaP79621 Olfr823-202ENSMUST00000213145 1431 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CiitaP79621 Olfr1112-202ENSMUST00000216772 1443 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CiitaP79621 Gm33680-202ENSMUST00000219411 3401 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CiitaP79621 Gm37814-201ENSMUST00000195820 3644 ntBASIC5.04□□□□□ -1.6
CiitaP79621 Gm44109-201ENSMUST00000204514 1954 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CiitaP79621 5830405F06Rik-201ENSMUST00000192753 1755 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CiitaP79621 Olfr799-205ENSMUST00000217364 1580 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
CiitaP79621 Gm27008-201ENSMUST00000182400 1360 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
CiitaP79621 Olfr410-203ENSMUST00000214490 5075 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CiitaP79621 Vmn1r171-205ENSMUST00000226771 2718 ntAPPRIS ALT2 BASIC5.03□□□□□ -1.6
CiitaP79621 Olfr362-202ENSMUST00000213817 4059 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CiitaP79621 Gm42494-201ENSMUST00000196515 3051 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CiitaP79621 Adam24-201ENSMUST00000051614 2887 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Hbp1-206ENSMUST00000176103 1319 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Gm37916-201ENSMUST00000192153 2435 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Acsm3-204ENSMUST00000106528 2755 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Gm44224-201ENSMUST00000204131 1463 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Gm16579-201ENSMUST00000161985 2566 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Gm26582-201ENSMUST00000181481 3135 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Gm43443-201ENSMUST00000202337 2393 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Ssx9-201ENSMUST00000103001 602 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Trav16d-dv11-201ENSMUST00000103606 353 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CiitaP79621 Vmn1r127-201ENSMUST00000105199 918 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CiitaP79621 Hmgb1-ps1-201ENSMUST00000119350 634 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Gm14986-201ENSMUST00000121262 1002 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Gm14303-201ENSMUST00000121320 171 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Gm12195-201ENSMUST00000144990 469 ntTSL 3 BASIC5.03□□□□□ -1.6
CiitaP79621 Gm22243-201ENSMUST00000178754 120 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Gm27564-201ENSMUST00000185196 96 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Mrgprc4-ps-201ENSMUST00000186018 964 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Gm10421-203ENSMUST00000190266 781 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 9430083B18Rik-201ENSMUST00000191908 863 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Gm20203-201ENSMUST00000192352 332 ntBASIC5.03□□□□□ -1.6
CiitaP79621 9530003O04Rik-201ENSMUST00000192663 908 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Serpinb10-203ENSMUST00000194951 1194 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CiitaP79621 Gm17967-201ENSMUST00000195319 647 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Gm44485-201ENSMUST00000199569 137 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Gng12-208ENSMUST00000204511 739 ntTSL 5 BASIC5.03□□□□□ -1.6
CiitaP79621 Gm33626-201ENSMUST00000206790 828 ntBASIC5.03□□□□□ -1.6
CiitaP79621 4930401A07Rik-201ENSMUST00000214657 746 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 AC159809.1-201ENSMUST00000216235 520 ntTSL 5 BASIC5.03□□□□□ -1.6
CiitaP79621 Vmn1r2-202ENSMUST00000226198 1126 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CiitaP79621 AC113031.3-201ENSMUST00000226552 190 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Olfr806-201ENSMUST00000095245 942 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
CiitaP79621 Kbtbd8-202ENSMUST00000119582 4518 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Adgrg2-201ENSMUST00000112398 3418 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Gm43654-201ENSMUST00000200664 3417 ntBASIC5.03□□□□□ -1.6
CiitaP79621 Gm5615-201ENSMUST00000098900 2348 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Gm30302-202ENSMUST00000220773 3511 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CiitaP79621 Zfp989-202ENSMUST00000146688 2295 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Gm43882-201ENSMUST00000204871 2264 ntBASIC5.03□□□□□ -1.6
CiitaP79621 E430024I08Rik-208ENSMUST00000223312 1573 ntTSL 5 BASIC5.03□□□□□ -1.6
CiitaP79621 Smgc-201ENSMUST00000088555 2977 ntAPPRIS P2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Zfp759-201ENSMUST00000052716 3482 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Hrnr-202ENSMUST00000093774 11187 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
CiitaP79621 Olfr1459-202ENSMUST00000213493 8854 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
CiitaP79621 Map3k19-201ENSMUST00000061512 3936 ntAPPRIS P2 TSL 5 BASIC5.03□□□□□ -1.6
CiitaP79621 Olfr1026-202ENSMUST00000217615 1538 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CiitaP79621 Pik3c2g-209ENSMUST00000187618 2023 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CiitaP79621 Scaper-205ENSMUST00000217647 4370 ntAPPRIS P2 TSL 5 BASIC5.02□□□□□ -1.61
CiitaP79621 Olfr699-202ENSMUST00000215952 3669 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
CiitaP79621 Slc31a1-202ENSMUST00000122092 4154 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
CiitaP79621 Vmn2r-ps94-201ENSMUST00000116665 1456 ntBASIC5.02□□□□□ -1.61
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms