Protein–RNA interactions for Protein: P35951

Ldlr, Low-density lipoprotein receptor, mousemouse

Predictions only

Length 862 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LdlrP35951 CT025616.1-201ENSMUST00000221158 412 ntBASIC5.23□□□□□ -1.57
LdlrP35951 4930559C10Rik-201ENSMUST00000223202 649 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LdlrP35951 CT010486.1-201ENSMUST00000224609 422 ntBASIC5.23□□□□□ -1.57
LdlrP35951 AC158392.2-201ENSMUST00000225402 969 ntBASIC5.23□□□□□ -1.57
LdlrP35951 AC119573.1-201ENSMUST00000227960 757 ntBASIC5.23□□□□□ -1.57
LdlrP35951 Gnrhr-201ENSMUST00000031172 1211 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LdlrP35951 Prr32-201ENSMUST00000040002 1110 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LdlrP35951 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
LdlrP35951 Rpl26-201ENSMUST00000073471 526 ntAPPRIS P2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LdlrP35951 Gm1330-201ENSMUST00000081553 474 ntAPPRIS P5 TSL 5 BASIC5.23□□□□□ -1.57
LdlrP35951 Gm23516-201ENSMUST00000093728 107 ntBASIC5.23□□□□□ -1.57
LdlrP35951 Zfp456-201ENSMUST00000057070 4126 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
LdlrP35951 Rabgap1-202ENSMUST00000066055 4247 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LdlrP35951 Gm45262-201ENSMUST00000209917 1463 ntBASIC5.23□□□□□ -1.57
LdlrP35951 Zfp353-ps-201ENSMUST00000107130 1650 ntBASIC5.23□□□□□ -1.57
LdlrP35951 Rsrc2-210ENSMUST00000182489 1665 ntTSL 5 BASIC5.23□□□□□ -1.57
LdlrP35951 Gm15638-201ENSMUST00000128159 2062 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LdlrP35951 CT030159.1-201ENSMUST00000221580 2261 ntBASIC5.23□□□□□ -1.57
LdlrP35951 Olfr1420-203ENSMUST00000217281 2998 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LdlrP35951 Olfr427-202ENSMUST00000213832 3866 ntAPPRIS P1 TSL 5 BASIC5.23□□□□□ -1.57
LdlrP35951 Wdr64-201ENSMUST00000094288 3817 ntAPPRIS P2 TSL 5 BASIC5.23□□□□□ -1.57
LdlrP35951 Gm37357-201ENSMUST00000192386 3123 ntBASIC5.23□□□□□ -1.57
LdlrP35951 Gm19552-201ENSMUST00000194744 2833 ntBASIC5.23□□□□□ -1.57
LdlrP35951 Clec2i-203ENSMUST00000159866 2330 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
LdlrP35951 Gabrg2-202ENSMUST00000070735 2234 ntAPPRIS P4 TSL 1 (best) BASIC5.23□□□□□ -1.57
LdlrP35951 4930533N22Rik-202ENSMUST00000206684 1503 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
LdlrP35951 Clk4-202ENSMUST00000109111 1427 ntTSL 2 BASIC5.23□□□□□ -1.57
LdlrP35951 Flrt2-201ENSMUST00000057324 7099 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 Vmn1r34-202ENSMUST00000226262 2952 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LdlrP35951 Gm43210-201ENSMUST00000196743 6152 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Vmn2r-ps130-201ENSMUST00000175853 2568 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LdlrP35951 Vmn2r-ps129-201ENSMUST00000177509 2568 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm37766-201ENSMUST00000192244 2567 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Olfr829-202ENSMUST00000212229 2590 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LdlrP35951 Snhg14-214ENSMUST00000191191 3991 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 Gm37890-201ENSMUST00000195610 3992 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm18186-201ENSMUST00000192239 1580 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm24265-201ENSMUST00000101833 141 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Tcrg-V3-201ENSMUST00000103559 350 ntAPPRIS ALT2 BASIC5.22□□□□□ -1.57
LdlrP35951 Gm12245-201ENSMUST00000117266 357 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm14365-201ENSMUST00000117535 587 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm15772-201ENSMUST00000118533 438 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Olfr1117-ps1-201ENSMUST00000118736 984 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LdlrP35951 Gm11280-201ENSMUST00000124912 268 ntTSL 5 BASIC5.22□□□□□ -1.57
LdlrP35951 Gm16373-201ENSMUST00000129517 303 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm25553-201ENSMUST00000158076 79 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm25348-201ENSMUST00000158961 111 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm16043-201ENSMUST00000160030 616 ntTSL 3 BASIC5.22□□□□□ -1.57
LdlrP35951 C130026I21Rik-207ENSMUST00000162421 591 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 1700071M16Rik-201ENSMUST00000164150 537 ntTSL 3 BASIC5.22□□□□□ -1.57
LdlrP35951 Mir5103-201ENSMUST00000175111 79 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm22122-201ENSMUST00000175147 200 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm20648-201ENSMUST00000175815 328 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm26318-201ENSMUST00000176507 96 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm24407-201ENSMUST00000177864 141 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Rps12-ps24-201ENSMUST00000182321 381 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Ranbp2-ps2-201ENSMUST00000184379 370 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm19029-201ENSMUST00000189923 564 ntBASIC5.22□□□□□ -1.57
LdlrP35951 4930404I20Rik-201ENSMUST00000203246 498 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 Gm44820-201ENSMUST00000207420 396 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm40692-201ENSMUST00000220411 491 ntBASIC5.22□□□□□ -1.57
LdlrP35951 AC121599.1-201ENSMUST00000224276 449 ntBASIC5.22□□□□□ -1.57
LdlrP35951 AC124549.1-201ENSMUST00000225912 333 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Olfr1018-201ENSMUST00000054201 936 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LdlrP35951 Olfr871-201ENSMUST00000073122 1147 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LdlrP35951 Olfr971-201ENSMUST00000075467 924 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LdlrP35951 Magea1-201ENSMUST00000078193 1108 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LdlrP35951 Vmn1r202-201ENSMUST00000078642 909 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LdlrP35951 Olfr98-201ENSMUST00000080759 1039 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LdlrP35951 Gm25475-201ENSMUST00000082825 180 ntBASIC5.22□□□□□ -1.57
LdlrP35951 n-R5s168-201ENSMUST00000083948 104 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Ccl8-201ENSMUST00000009329 511 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 Gm12888-201ENSMUST00000097905 1181 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 Olfr599-201ENSMUST00000098201 1050 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LdlrP35951 Olfr598-201ENSMUST00000098202 960 ntAPPRIS P1 BASIC5.22□□□□□ -1.57
LdlrP35951 3222401L13Rik-202ENSMUST00000192137 6292 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Gm43490-201ENSMUST00000197593 2652 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Serpinb5-201ENSMUST00000086701 2572 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 Gm38590-202ENSMUST00000210654 1803 ntTSL 5 BASIC5.22□□□□□ -1.57
LdlrP35951 Gm43437-201ENSMUST00000198535 3955 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Zfp995-201ENSMUST00000106026 1744 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 Gm8141-201ENSMUST00000190856 1723 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Olfr196-202ENSMUST00000205471 1711 ntAPPRIS P1 TSL 3 BASIC5.22□□□□□ -1.57
LdlrP35951 Gm15675-201ENSMUST00000130486 3681 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 Clk4-203ENSMUST00000109113 1627 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 Olfr644-202ENSMUST00000213184 3572 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
LdlrP35951 Il13ra2-202ENSMUST00000112827 1536 ntAPPRIS P1 TSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 4930539J05Rik-201ENSMUST00000181619 1406 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 CT025710.1-201ENSMUST00000222949 2533 ntBASIC5.22□□□□□ -1.57
LdlrP35951 Tmc5-204ENSMUST00000121744 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 D7Ertd443e-202ENSMUST00000106129 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 Scn9a-206ENSMUST00000164384 7530 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
LdlrP35951 Herc2-202ENSMUST00000164095 15261 ntAPPRIS P2 TSL 1 (best) BASIC5.22□□□□□ -1.57
LdlrP35951 Adam28-201ENSMUST00000022642 3110 ntAPPRIS P4 TSL 1 (best) BASIC5.21□□□□□ -1.57
LdlrP35951 Gm38126-201ENSMUST00000195297 4003 ntBASIC5.21□□□□□ -1.57
LdlrP35951 Vmn2r29-201ENSMUST00000170922 2559 ntAPPRIS P1 TSL 5 BASIC5.21□□□□□ -1.57
LdlrP35951 Gm3962-201ENSMUST00000173027 2587 ntBASIC5.21□□□□□ -1.57
LdlrP35951 Zfp442-201ENSMUST00000109916 2922 ntAPPRIS P1 TSL 1 (best) BASIC5.21□□□□□ -1.57
LdlrP35951 Gm43369-201ENSMUST00000196373 1552 ntBASIC5.21□□□□□ -1.57
LdlrP35951 Gm5444-201ENSMUST00000065956 2468 ntTSL 1 (best) BASIC5.21□□□□□ -1.57
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms