Protein–RNA interactions for Protein: P11087

Col1a1, Collagen alpha-1(I) chain, mousemouse

Predictions only

Length 1,453 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col1a1P11087 Sorbs2-203ENSMUST00000124544 3798 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
Col1a1P11087 Vmn1r171-203ENSMUST00000226321 3067 ntAPPRIS ALT2 BASIC4.9□□□□□ -1.63
Col1a1P11087 Gm45555-201ENSMUST00000210028 2602 ntBASIC4.9□□□□□ -1.63
Col1a1P11087 4930579C12Rik-202ENSMUST00000187015 3676 ntTSL 2 BASIC4.89□□□□□ -1.63
Col1a1P11087 Olfr1131-203ENSMUST00000216756 1459 ntTSL 3 BASIC4.89□□□□□ -1.63
Col1a1P11087 Gm44847-201ENSMUST00000207104 1991 ntBASIC4.89□□□□□ -1.63
Col1a1P11087 Slc22a30-202ENSMUST00000096269 2255 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col1a1P11087 Olfr596-201ENSMUST00000104880 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col1a1P11087 Ttc29-203ENSMUST00000117845 650 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
Col1a1P11087 Gm12978-201ENSMUST00000121250 522 ntBASIC4.89□□□□□ -1.63
Col1a1P11087 Gm14003-201ENSMUST00000130919 313 ntTSL 3 BASIC4.89□□□□□ -1.63
Col1a1P11087 AI506816-203ENSMUST00000198461 503 ntTSL 5 BASIC4.89□□□□□ -1.63
Col1a1P11087 Olfr566-202ENSMUST00000209952 1066 ntAPPRIS ALT1 TSL 3 BASIC4.89□□□□□ -1.63
Col1a1P11087 AC154368.1-201ENSMUST00000223465 205 ntTSL 5 BASIC4.89□□□□□ -1.63
Col1a1P11087 Olfr273-201ENSMUST00000051520 1059 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col1a1P11087 Olfr566-201ENSMUST00000071393 951 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
Col1a1P11087 Olfr603-201ENSMUST00000071844 939 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col1a1P11087 Tbl1xr1-202ENSMUST00000192328 3323 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col1a1P11087 0610010F05Rik-201ENSMUST00000043356 4392 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
Col1a1P11087 Gm16421-201ENSMUST00000117616 1557 ntBASIC4.89□□□□□ -1.63
Col1a1P11087 Vmn1r196-204ENSMUST00000228382 6525 ntAPPRIS P2 BASIC4.89□□□□□ -1.63
Col1a1P11087 Kcnt2-202ENSMUST00000120709 5790 ntTSL 5 BASIC4.89□□□□□ -1.63
Col1a1P11087 Cnot1-202ENSMUST00000098473 8390 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col1a1P11087 Vmn2r32-201ENSMUST00000094866 3513 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
Col1a1P11087 Naa16-201ENSMUST00000022597 13223 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
Col1a1P11087 Nlgn1-202ENSMUST00000108308 4272 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
Col1a1P11087 Vmn1r215-202ENSMUST00000228092 2790 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
Col1a1P11087 Rgs5-201ENSMUST00000027997 4096 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col1a1P11087 Gm25727-201ENSMUST00000104522 131 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Gm12571-201ENSMUST00000118132 243 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Gm15988-201ENSMUST00000118677 367 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Gm22398-201ENSMUST00000174941 125 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Gm25731-201ENSMUST00000175167 125 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Vmn2r-ps122-201ENSMUST00000176687 906 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Gm43774-201ENSMUST00000196327 878 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Gm44523-201ENSMUST00000205616 417 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Gm18306-201ENSMUST00000207338 569 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Gm45553-201ENSMUST00000209929 507 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Gm18116-201ENSMUST00000220920 537 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 AC154335.1-201ENSMUST00000224744 395 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 AC154727.1-201ENSMUST00000226537 499 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Olfr846-201ENSMUST00000078774 942 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
Col1a1P11087 Gpr174-203ENSMUST00000118820 5112 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col1a1P11087 Zfp595-201ENSMUST00000109735 3896 ntAPPRIS P2 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col1a1P11087 Cyp39a1-201ENSMUST00000170988 3053 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
Col1a1P11087 Zfp583-206ENSMUST00000165705 1707 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col1a1P11087 Kif20b-201ENSMUST00000087341 5564 ntAPPRIS P2 TSL 5 BASIC4.88□□□□□ -1.63
Col1a1P11087 Olfr430-202ENSMUST00000213425 3873 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col1a1P11087 Rps6ka3-204ENSMUST00000112493 3671 ntTSL 5 BASIC4.88□□□□□ -1.63
Col1a1P11087 Sult1b1-202ENSMUST00000117455 2612 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col1a1P11087 Gm45884-201ENSMUST00000209540 3416 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Gm38020-201ENSMUST00000193066 4676 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Olfr1243-202ENSMUST00000144885 3148 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Col1a1P11087 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Vmn2r30-202ENSMUST00000174368 3688 ntTSL 2 BASIC4.88□□□□□ -1.63
Col1a1P11087 Olfr1484-203ENSMUST00000215567 3699 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col1a1P11087 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
Col1a1P11087 Gm25764-201ENSMUST00000104092 134 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Zfp931-202ENSMUST00000108924 962 ntAPPRIS P1 TSL 3 BASIC4.88□□□□□ -1.63
Col1a1P11087 Gm14399-203ENSMUST00000109059 703 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col1a1P11087 Gm14399-205ENSMUST00000109062 626 ntTSL 5 BASIC4.88□□□□□ -1.63
Col1a1P11087 Zfp931-204ENSMUST00000131702 704 ntTSL 3 BASIC4.88□□□□□ -1.63
Col1a1P11087 Gm12249-201ENSMUST00000132323 719 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
Col1a1P11087 Gm26276-201ENSMUST00000157099 109 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Gm6712-202ENSMUST00000186431 526 ntTSL 5 BASIC4.88□□□□□ -1.63
Col1a1P11087 Gm8939-201ENSMUST00000192577 964 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Gm29704-201ENSMUST00000196011 253 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 AC166263.1-201ENSMUST00000218586 238 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 CT030184.2-201ENSMUST00000223064 263 ntBASIC4.88□□□□□ -1.63
Col1a1P11087 Dnah6-201ENSMUST00000064948 12652 ntAPPRIS P2 TSL 5 BASIC4.87□□□□□ -1.63
Col1a1P11087 Gm10340-201ENSMUST00000170790 1755 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col1a1P11087 Ush2a-201ENSMUST00000060479 15695 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col1a1P11087 Vmn1r169-203ENSMUST00000227547 2322 ntAPPRIS P1 BASIC4.87□□□□□ -1.63
Col1a1P11087 Gm28445-201ENSMUST00000187686 1498 ntTSL 5 BASIC4.87□□□□□ -1.63
Col1a1P11087 Dpp10-202ENSMUST00000112606 15297 ntAPPRIS P2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col1a1P11087 Olfr123-202ENSMUST00000214770 2883 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col1a1P11087 Gm37999-201ENSMUST00000195178 1809 ntBASIC4.87□□□□□ -1.63
Col1a1P11087 Olfr228-202ENSMUST00000217292 1854 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col1a1P11087 Gm7618-201ENSMUST00000121643 171 ntBASIC4.87□□□□□ -1.63
Col1a1P11087 Gm23168-201ENSMUST00000157156 143 ntBASIC4.87□□□□□ -1.63
Col1a1P11087 9330182O14Rik-201ENSMUST00000179120 423 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
Col1a1P11087 Gm10067-201ENSMUST00000179462 348 ntBASIC4.87□□□□□ -1.63
Col1a1P11087 2010005H15Rik-202ENSMUST00000187183 639 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col1a1P11087 Gm28654-201ENSMUST00000189801 379 ntBASIC4.87□□□□□ -1.63
Col1a1P11087 AC161256.1-201ENSMUST00000217312 213 ntBASIC4.87□□□□□ -1.63
Col1a1P11087 AC158807.1-201ENSMUST00000217959 187 ntBASIC4.87□□□□□ -1.63
Col1a1P11087 Gm8288-201ENSMUST00000223406 593 ntBASIC4.87□□□□□ -1.63
Col1a1P11087 AC158142.1-201ENSMUST00000226721 416 ntBASIC4.87□□□□□ -1.63
Col1a1P11087 AC164883.9-201ENSMUST00000228042 399 ntBASIC4.87□□□□□ -1.63
Col1a1P11087 Adam5-201ENSMUST00000050300 2560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
Col1a1P11087 Gm45378-201ENSMUST00000211063 2711 ntBASIC4.87□□□□□ -1.63
Col1a1P11087 Chd9-201ENSMUST00000048665 12008 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col1a1P11087 Olfr1323-203ENSMUST00000213556 5431 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col1a1P11087 Gm43389-201ENSMUST00000196080 2595 ntBASIC4.86□□□□□ -1.63
Col1a1P11087 Dnah8-201ENSMUST00000170651 14583 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
Col1a1P11087 Spag17-204ENSMUST00000164539 7862 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
Col1a1P11087 Gm14033-201ENSMUST00000128307 2265 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
Col1a1P11087 Gimap4-204ENSMUST00000119575 900 ntTSL 3 BASIC4.86□□□□□ -1.63
Col1a1P11087 Gm14687-201ENSMUST00000120206 363 ntBASIC4.86□□□□□ -1.63
Col1a1P11087 Gm13852-201ENSMUST00000122350 242 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms