Protein–RNA interactions for Protein: Q9Z0G9

Cldn3, Claudin-3, mousemouse

Predictions only

Length 219 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cldn3Q9Z0G9 4930503E14Rik-201ENSMUST00000100688 1287 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm7834-201ENSMUST00000117560 437 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm12328-201ENSMUST00000118611 197 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm5133-201ENSMUST00000118940 1255 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Klra4-201ENSMUST00000119096 1245 ntAPPRIS P1 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Rps15a-ps4-201ENSMUST00000119415 392 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Cmc4-202ENSMUST00000120286 516 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm6062-201ENSMUST00000120462 631 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Vmn1r-ps102-201ENSMUST00000120663 886 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Rpl26-ps5-201ENSMUST00000122220 439 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Olfr367-ps-202ENSMUST00000143957 942 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm26085-201ENSMUST00000157900 116 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm3053-201ENSMUST00000161709 616 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Vmn1r-ps148-201ENSMUST00000176775 455 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 4831440E17Rik-201ENSMUST00000181942 1028 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Olr1-204ENSMUST00000183258 468 ntAPPRIS ALT2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm29133-201ENSMUST00000189155 885 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm37684-201ENSMUST00000192779 355 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm19080-201ENSMUST00000196082 550 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Cycs-ps2-201ENSMUST00000197114 292 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 5033403H07Rik-203ENSMUST00000198580 467 ntTSL 2 BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Olfr793-ps1-201ENSMUST00000205161 895 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm36633-201ENSMUST00000205873 647 ntTSL 1 (best) BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm45171-201ENSMUST00000206360 736 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm18877-201ENSMUST00000207706 539 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 AC122924.1-201ENSMUST00000222044 163 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 AL606513.1-201ENSMUST00000225369 579 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 AC141884.1-201ENSMUST00000226327 636 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 AC154270.1-201ENSMUST00000227226 426 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Olfr430-201ENSMUST00000055873 954 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Zfp982-201ENSMUST00000063704 1244 ntAPPRIS P1 TSL 3 BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Olfr699-201ENSMUST00000065024 951 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Tas2r104-201ENSMUST00000072404 909 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Olfr1162-201ENSMUST00000099837 945 ntAPPRIS P1 BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Fcrl5-203ENSMUST00000178261 1791 ntAPPRIS ALT2 TSL 5 BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Kcnrg-201ENSMUST00000051184 1766 ntAPPRIS P2 TSL 1 (best) BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Olfr1297-202ENSMUST00000213398 6998 ntAPPRIS P1 TSL 2 BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Gm38057-201ENSMUST00000195551 3203 ntBASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 Olfr102-202ENSMUST00000217590 2783 ntAPPRIS P1 TSL 5 BASIC4.47□□□□□ -1.69
Cldn3Q9Z0G9 1700017N19Rik-203ENSMUST00000187119 1524 ntTSL 5 BASIC4.46□□□□□ -1.69
Cldn3Q9Z0G9 Pramel6-201ENSMUST00000026956 1540 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Cldn3Q9Z0G9 Serpinb3a-201ENSMUST00000027567 1620 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Cldn3Q9Z0G9 1700017N19Rik-204ENSMUST00000188736 1709 ntTSL 5 BASIC4.46□□□□□ -1.69
Cldn3Q9Z0G9 Pbrm1-201ENSMUST00000022471 5871 ntTSL 5 BASIC4.46□□□□□ -1.69
Cldn3Q9Z0G9 Cyp3a11-201ENSMUST00000035918 2344 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Cldn3Q9Z0G9 Scel-201ENSMUST00000095576 2424 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.69
Cldn3Q9Z0G9 Cnot4-206ENSMUST00000202143 3202 ntAPPRIS ALT1 TSL 1 (best) BASIC4.46□□□□□ -1.69
Cldn3Q9Z0G9 AC154313.1-201ENSMUST00000217755 3841 ntBASIC4.46□□□□□ -1.69
Cldn3Q9Z0G9 Hdx-202ENSMUST00000113422 9534 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 9430018G01Rik-201ENSMUST00000203260 3758 ntTSL 5 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Vmn2r26-201ENSMUST00000032238 2568 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm7988-201ENSMUST00000196623 2297 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm21778-202ENSMUST00000185926 1482 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm21854-202ENSMUST00000190391 1480 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Ccr9-205ENSMUST00000180093 4239 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Smpx-202ENSMUST00000112520 503 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm14885-201ENSMUST00000117969 496 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm14878-201ENSMUST00000118167 293 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm11877-201ENSMUST00000118921 852 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm12978-201ENSMUST00000121250 522 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 1700092C17Rik-201ENSMUST00000135792 424 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 AI662270-201ENSMUST00000142709 304 ntTSL 2 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Cldn34-ps-201ENSMUST00000145498 600 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm23906-201ENSMUST00000157573 128 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm26312-201ENSMUST00000157769 165 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Vmn1r122-201ENSMUST00000164409 918 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Vmn1r159-201ENSMUST00000167871 918 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm4181-201ENSMUST00000170249 898 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm8890-202ENSMUST00000177727 465 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 1700003C15Rik-201ENSMUST00000185360 1224 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm28543-201ENSMUST00000188986 509 ntTSL 5 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 1700074H08Rik-201ENSMUST00000189831 555 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm37167-201ENSMUST00000194946 396 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Csn1s2a-202ENSMUST00000196585 762 ntAPPRIS ALT2 TSL 3 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm43037-201ENSMUST00000196808 250 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm18867-201ENSMUST00000198022 1179 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm42625-201ENSMUST00000198611 922 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Olfr1434-203ENSMUST00000208197 1229 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm17766-201ENSMUST00000209223 442 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Olfr852-ps1-201ENSMUST00000212273 226 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm40477-202ENSMUST00000221505 881 ntTSL 3 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 AC159263.3-201ENSMUST00000223434 460 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 AC154239.2-201ENSMUST00000227859 233 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 AC127371.1-201ENSMUST00000228516 312 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Olfr509-201ENSMUST00000061690 1075 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Csn1s2a-201ENSMUST00000076379 920 ntAPPRIS P3 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gpr21-201ENSMUST00000065441 3619 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Erv3-201ENSMUST00000040941 3378 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Zfp976-203ENSMUST00000187616 1908 ntTSL 5 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm45137-201ENSMUST00000208652 4415 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Olfr536-205ENSMUST00000215768 4231 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm16332-201ENSMUST00000134229 2967 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Olfr1257-202ENSMUST00000111519 2756 ntAPPRIS P1 TSL 2 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Adam34-201ENSMUST00000110411 2584 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 1700097M23Rik-201ENSMUST00000204079 1522 ntBASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Ddx60-202ENSMUST00000093485 5989 ntAPPRIS ALT2 TSL 5 BASIC4.46□□□□□ -1.7
Cldn3Q9Z0G9 Gm26655-203ENSMUST00000181095 2078 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cldn3Q9Z0G9 Gm26680-203ENSMUST00000181701 2078 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cldn3Q9Z0G9 Gm26630-204ENSMUST00000181759 2078 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Cldn3Q9Z0G9 Gm26650-204ENSMUST00000181881 2078 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
Retrieved 100 of 76,532 protein–RNA pairs in 77.4 ms